Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03505 ATGAAGCAGTTTATGGTTTTGTACCTTATGATTTGGATTTGGGTAGTTCTCTTTTGTGGTATTGTTCATGGTGAAAGGCCTGAAAGTGTGAACATTGGAGCAGTTTTCACCTTTGATTCAGTCATAGGTAGAGTTGCAAAGGTGGCTATGGAAATGGCTGTTTCTGATATCAATTCTGACCCTACAATTCTTAGTGAGACTAATCTCAATTTGATAATGAAGGATGGTATGTGTAATGCTTTTCTTGGATCAACTGGAGCTTTTCAAGTACTTGAGCAAGGGGTTGCAGCCATAATTGGTCCACAATCATCCGCCATAGCTCATTCGATTTCTCAAATAGCCGATGCAGTTCATGTTCCCCTTATTTCATATGCTGCAACTGATCCAACCCTATCATCCCTTCAATTTCCTCTCTTTTTCCGTACCATACAAAGTGACTCAGAGCAAATGGTCGCAATGGCCAATCTGATCGACTTCAACGGATGGAAAGAGGTCATTGTTATATTTTTGGATGACGATTATGGAAGAAACGGAATATCTGCTTTGAGCGATGAACTTGAAAAAAGGAGATTGAAACTAGCTCACAAACTACCTTTAAGTATTCACTACGATCTAGATGAAATCACTAAGTTGCTCAATCAATCCAGAGTATATAGTCCTCGTGTTTTTGTCGTTCATGTTAACCCAGATCCGAGATTGAGAATTTTTTCCATTGCTCGTAAACTTCAAATGATGACTAGTGACTATGTATGGCTTGCCACAGATTGGCTCTCTGCTACCTTACATTCATTTTCGCCAGCGAATCAGAACTCTCTTAGCGTTGTCGAAGGAGTTGTTGCTCTTCGTCAACACATTCCGGATTCTAGAAAGAAAAGAGATTTTATTTCTCGATGGAAAAAAATGCAAAAAGGTGTAGCAAATACTAGTTTGAACTCCTATGGATTTTTCGCTTATGATACAGTTTGGACAGTTGCACATTCAATTGATAAATTTTTGGAAGTATATAATAACATTACTTTCTCGCTTCATGAAAACAATATGGTACCGCATACGGAAGGAATTGGTATTCAGCTTGAGAAGCTCAAAGTCTTCGCTGGTGGATTAGATCTTGTTAACATATTATTACAGTCAAATTTTAGGGGCCTGAGTGGTCAAATTCGGTTTAGTTCGGACAGAAATATCATTAGTAGTGGCTATGATGTTATCAATATCAATCAGATGAAAATTAATAAGGTTGGTTATTGGTCTAATCATTCAGGATTTTCTGTTCTACCTCCCGAAGTTCTTGTGAAAAAGAAACATCGCAGGGTTTCCGTAGATCAGAAGCTTGGCAATATAACTTGGCCAGGTGGGAAAACAGAACGACCGCGCGGCTGGGTGATTGCTGATAATGCGAAGCCACTGAGAATTGGAGTGCCAAAGAGGGCAAGTTTTGTTGAATTTGTCACTGAAGTGCAAGAGAGTCATCAGATGCAAGGGTATTGTATCGATATCTTCATGAAAGCCCTGGAATTTATTCCGTATGAAATTCCTTTTGTATTCAAGCCTGTTGGAAACGGTAAAGCAAATCCAAATTATGATGCACTTGTCAAAAAGCTTGACGAAAACGTATATGATGCAGTTGTTGGAGACATTGCGATTGTGACAAACCGCACAAAAATTGCGGACTTTTCTCAGCCTTTTGCATCGTCAAGCCTTGTTGTAGTGGCTCCTATCAACAGTTCAAAATCAAATGCTTGGGTATTCCTTAAACCATTCTCTCCAGATATGTGGTGTATTATTGTTGCATCATTTATGATGATCGGAGTGGTTATATGGATTCTTGAACACCGAGTCAACGATGACTTCCGTGGTCCTCCTAAGAGACAACTTGTGACAATGTTTATGTTCAGCCTCTCAACCCTGTTTAAGACAAACAATAATACCGTAAGCTCTCTTTCTAAAATGGTGTTGATAGTATGGTTTTTCCTACTGATGGTGATCACTGCTAGCTATACAGCAAGCTTGACTTCAATTCTCACAGTGGAGCAGCTTTCGTCGCCGATTACAGGAATTGATAGTTTGATTGCAAGTAACTGGCCTATTGGATACCAAGTAGGGTCATTTGCTTACAGCTATCTGACAGATAATCTTTATGTATCAAGTTCAAGACTTGTTTCCTTAGGCTCCCCTGAGGAATATGCTGTAGCACTTCGGAATGGACCGTCCGGTGGTGGTGTAGCAGCTATCGTAGATGAGCTTCCGTATGTTGAGTTATTTCTGTCAAAAGAAACTGATTTTGGTATTATCGGTCAGCCGTTTACTAGAAGCAGTTGGGGATTTGCTTTTCAAAGAGAATCTCCTCTTGCACTTGACATGTCAACAGCAATTCTAAAACTAGCTGAGAGTGGAGAGCTTCAAAAGATACATGAGAATTGGTTTTGTAAGATGGGTTGTCCTGGTGAAAGGAAACGCGACTCTAAACCTGACCAACTTCACCTGAGCAGCTTTTGGGGTCTATATCTCTCGAGCGGCATCATCTCTGTCGTCGCGCTTGTTCTGTTTCTGCTGCGAATGATTAGCCAATATGTTGGTTTCAAACAAAGTCAAAAGGAAGTGGTTGCTTCATCGTCAAAACCACCGGAAAGTCATTGTTCACGGGTTGTTGTTAACTTTTTTAACTTCATTGATAAAAAGGAAGATGCCATCAAGAAAATGTTCACTCAATGTGACAATACTCATAACCCCAACTCAGAATTATGA 2742 0.399 MKQFMVLYLMIWIWVVLFCGIVHGERPESVNIGAVFTFDSVIGRVAKVAMEMAVSDINSDPTILSETNLNLIMKDGMCNAFLGSTGAFQVLEQGVAAIIGPQSSAIAHSISQIADAVHVPLISYAATDPTLSSLQFPLFFRTIQSDSEQMVAMANLIDFNGWKEVIVIFLDDDYGRNGISALSDELEKRRLKLAHKLPLSIHYDLDEITKLLNQSRVYSPRVFVVHVNPDPRLRIFSIARKLQMMTSDYVWLATDWLSATLHSFSPANQNSLSVVEGVVALRQHIPDSRKKRDFISRWKKMQKGVANTSLNSYGFFAYDTVWTVAHSIDKFLEVYNNITFSLHENNMVPHTEGIGIQLEKLKVFAGGLDLVNILLQSNFRGLSGQIRFSSDRNIISSGYDVININQMKINKVGYWSNHSGFSVLPPEVLVKKKHRRVSVDQKLGNITWPGGKTERPRGWVIADNAKPLRIGVPKRASFVEFVTEVQESHQMQGYCIDIFMKALEFIPYEIPFVFKPVGNGKANPNYDALVKKLDENVYDAVVGDIAIVTNRTKIADFSQPFASSSLVVVAPINSSKSNAWVFLKPFSPDMWCIIVASFMMIGVVIWILEHRVNDDFRGPPKRQLVTMFMFSLSTLFKTNNNTVSSLSKMVLIVWFFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYSYLTDNLYVSSSRLVSLGSPEEYAVALRNGPSGGGVAAIVDELPYVELFLSKETDFGIIGQPFTRSSWGFAFQRESPLALDMSTAILKLAESGELQKIHENWFCKMGCPGERKRDSKPDQLHLSSFWGLYLSSGIISVVALVLFLLRMISQYVGFKQSQKEVVASSSKPPESHCSRVVVNFFNFIDKKEDAIKKMFTQCDNTHNPNSEL 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03505 913 FunFam Glutamate receptor 704 811 - -
Mepo6g03505 913 Pfam Ligand-gated ion channel 808 835 IPR001320 GO:0015276|GO:0016020
Mepo6g03505 913 CDD PBP1_GABAb_receptor_plant 31 423 IPR044440 -
Mepo6g03505 913 FunFam Glutamate receptor 145 309 - -
Mepo6g03505 913 PIRSF IGluLR_plant 1 912 IPR017103 -
Mepo6g03505 913 CDD GluR_Plant 466 807 - -
Mepo6g03505 913 SUPERFAMILY Periplasmic binding protein-like I 26 450 IPR028082 -
Mepo6g03505 913 SMART GluR_14 469 809 IPR001320 GO:0015276|GO:0016020
Mepo6g03505 913 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 856 IPR015683 -
Mepo6g03505 913 Gene3D - 460 578 - -
Mepo6g03505 913 Gene3D - 48 396 - -
Mepo6g03505 913 FunFam Glutamate receptor 463 579 - -
Mepo6g03505 913 Gene3D - 755 814 - -
Mepo6g03505 913 Gene3D - 145 421 - -
Mepo6g03505 913 Pfam Receptor family ligand binding region 48 405 IPR001828 -
Mepo6g03505 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 43 59 - -
Mepo6g03505 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 103 131 - -
Mepo6g03505 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Mepo6g03505 913 FunFam Glutamate receptor 579 716 - -
Mepo6g03505 913 Gene3D - 579 707 - -
Mepo6g03505 913 SUPERFAMILY Periplasmic binding protein-like II 446 807 - -
Mepo6g03505 913 Pfam Bacterial extracellular solute-binding proteins, family 3 481 807 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03505 Mepo-Chr6 47246214 47251752 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03505 15 908 Ion Channels AT2G32400 54.444 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03505 K05387 - gmx:100784247 1441.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03505 6 47246214 47251752 Mepo6g03505 6 47246214 47251752 ECH