Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03488 ATGGAGAAAACGATCTCGAACATCAAAATCAACAACAACAACAACAACAACAATAATTATGTTGAGGTTGACATTGACTCATCAAAAGATGATGTTGATGCTAGAACTGACATGAAGAAGGGACCGTGGACCCCACATGAAGACATGATATTGACGGAGTACGTGAATAAGCATGGTGAAGGAAATTGGAATTCTGTTCAGAAGAATTCAGGGTTGTTAAGGTGTGGAAAAAGCTGCAGACTTAGATGGGCGAATCATCTGAGGCCGAATCTTAAAAAGGGTTCATTTTCTGACGAGGAAGAAAAAATCATCATTGAACTTCATGCTAAGCTTGGAAACAAATGGGCTCGAATGGCTACTCAGTTGCCCGGAAGAACAGATAACGAAATCAAAAACTTTTGGAACACGAGAGTGAAAAGGCGCCAGAGAGCCGGTTTACCTATTTATCCTCCAGAAATCCAAGCAGAAGCTATTGTATACAATGATAAACTATTGCAACTACAACATGAACCTTTATCTTCCTCATCATTGTCATTTTCTTTACTCCTATCTTCTTGTTACCCTAAGAAGCTTGATGATCCAAACCATTATGATTATAATCCTCCACAAAACAACTCTGATTCTTCTAATCACTACACCAATCCATGTCCACAATTCAACTTATCCAATGAAGAAAACATTGAGATTAATGAAACTCTTGCTTTGCAAAAATCACCTTCACTTTCACCTTATCCATCTTCATCATCAAATATTTTCAACCAAAATTTTACTCCTCCAAGTGATTCACATGATTACCAATATTCTGAAAATTTGAGCTATGATCATCATGGATTCAATGCAGGATCTCTGTATGATTCTGAGACTCCTGCTTCATCATATGCTAGTGGTGTTGATGGTAATTTTATGGGAAATTCTAGCATGGTTAATGATTACTATGAAGTTGCACCATTATCCCATGAAGGAAAAAATAGTGGACTTTTGGATGATCTTGTGATGGAAGGTAGAAGTATTTCTTGCAATGATAAGGCTAAGAGTGAGGATTCAACATATAAGGGGAGTGTATCTCGTAAGAGGAAAAGCATGGAGGGTGAAGAATATGCAGGGGAAGAAAGTTTTTCCATGAAGAAGAAGAATATTGATGAGATTCAGAAGAAAGATTTCAGCTCTTCTCAATTGTCAACAGGGAAGAAACCAGTCCAGGAGGATGAGGTAGAAGAGCTGAATACAATGTACGATGATGATTTGGATTGCTTGCTCAACAATTTTCCCTCAGAAATACCAATGCCTGAATGGTATTGTAGAGGAAAAAGTCAGTCATTGGGAACTGAAACTCCAACTGATAAAGCTTCTTCATCCGGTGGTCCCACCAATCAAGAATTTGCTTGGACTCTTGGATCAAATTGGAACAACATGCCTGGCATATGTTAA 1428 0.3803 MEKTISNIKINNNNNNNNNYVEVDIDSSKDDVDARTDMKKGPWTPHEDMILTEYVNKHGEGNWNSVQKNSGLLRCGKSCRLRWANHLRPNLKKGSFSDEEEKIIIELHAKLGNKWARMATQLPGRTDNEIKNFWNTRVKRRQRAGLPIYPPEIQAEAIVYNDKLLQLQHEPLSSSSLSFSLLLSSCYPKKLDDPNHYDYNPPQNNSDSSNHYTNPCPQFNLSNEENIEINETLALQKSPSLSPYPSSSSNIFNQNFTPPSDSHDYQYSENLSYDHHGFNAGSLYDSETPASSYASGVDGNFMGNSSMVNDYYEVAPLSHEGKNSGLLDDLVMEGRSISCNDKAKSEDSTYKGSVSRKRKSMEGEEYAGEESFSMKKKNIDEIQKKDFSSSQLSTGKKPVQEDEVEELNTMYDDDLDCLLNNFPSEIPMPEWYCRGKSQSLGTETPTDKASSSGGPTNQEFAWTLGSNWNNMPGIC 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03488 475 Gene3D - 95 141 - -
Mepo6g03488 475 MobiDBLite consensus disorder prediction 1 20 - -
Mepo6g03488 475 SMART sant 39 89 IPR001005 -
Mepo6g03488 475 SMART sant 92 140 IPR001005 -
Mepo6g03488 475 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Mepo6g03488 475 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
Mepo6g03488 475 CDD SANT 95 136 IPR001005 -
Mepo6g03488 475 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Mepo6g03488 475 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 87 IPR017930 -
Mepo6g03488 475 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Mepo6g03488 475 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 21 439 - -
Mepo6g03488 475 FunFam MYB-related transcription factor 39 92 - -
Mepo6g03488 475 MobiDBLite consensus disorder prediction 437 463 - -
Mepo6g03488 475 MobiDBLite consensus disorder prediction 342 371 - -
Mepo6g03488 475 CDD SANT 42 87 IPR001005 -
Mepo6g03488 475 SUPERFAMILY Homeodomain-like 37 134 IPR009057 -
Mepo6g03488 475 FunFam Transcription factor GAMYB 95 141 - -
Mepo6g03488 475 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Mepo6g03488 475 Gene3D - 39 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03488 Mepo-Chr6 47100352 47103559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03488 38 164 MYB Transcription Factor Family AT2G32460 81.890 1.28e-71 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo6g03488 Myb_DNA-binding 3.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03488 K09422 - gmx:100784779 448.743