Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03484 ATGGAGATGGAGTGGACTAGAGGCAACATCATCGGACATGGCTCATCCGCCACCGTCTACCTCGCCACCTCTCGTCGCTCCACCGATGTCTCCGCGGTTAAATCCGCAGAGACATCACTACCAAACTCAAAACAACTCCAGAGAGAACAGAGAATTCTTTCTTCTCTGTCCTCTCCTTACATAGTTACCTACAAAGGTTGCAATTTTTCAAAGGAGAATAACAAGCACGTGTTCAATGTTTTCATGGAGTACATGTCCTTTGGAAATCTCTCTCAGGTGACTTGCCGGAACGGTGGCCGGCTCAACGAGGCGATGATAGGATACTACACAAGACAAATTGTTGAAGGACTTGAGTACTTGCATTCAAAAGGTGTAGTGCATTGTGATATCAAAGGTAGTAACATATTGGTATGTGAAAAAGGAGTCAAAATTGGAGACTTTGGTTGTGCAAAGATGGTCGATGAAATTGCGCCGGTGGCCGGAACACCGATGTATATGGCGCCGGAGGTGGCGCGCGGCGAAGAACAAGGGTACCCTTGTGATATTTGGTCACTTGGTTGCACTATTGTTGAAATGGCAACTGGGTTTTCACCTTGGTCCAATGTAGATGACCCTGTTAATGTTCTGTATCGTGTTGCATATTCTGATGAAGTTCCAATAATTCCTTGTTTTTTATCTGAACAAGCAAAGGATTTCTTGGAGAAGTGTTTTATGAGGGATTCTAAGGAGAGGTGGAGTTGTAGTGAATTGTTGAAGCACCCATTTCTTGATGAATTTGATTCTAGTGTTGAGAAAATTGATGAATTTGATTCATGTTCACCAACTAGTATTCTTGAACAGGGCTTTTGGAATTGTGATGAAGGGTCAGAAAGTTTCTTTTTTGATGATTTGGGTAAGACTAGTTTTGTGAATTGTCCTGTTGGTAGGATCAAAAAGCTAGCTTTGTGTTCAAGGGATCCATGTTGGAAATGGGGTGATGAGAACTGGATTACAACTAGAGGGAATGATGCAGATGCAGGGTCTTCAATTAGTGATGAATTGGATTTTTATGAGTTAGAGAAAAGTGATTTTAGTGGTAGAATTAGTGGTAATTATTTTGATTATGATCATTCTAATTGTAAGATTAGGGATGTTAGTTTTGTAGCTAATGGTCTTAATTTTGGGAGAGGCACTGGAAGGTTGATGCCCCATTCAACATTAGATTTTTTATAA 1212 0.4101 MEMEWTRGNIIGHGSSATVYLATSRRSTDVSAVKSAETSLPNSKQLQREQRILSSLSSPYIVTYKGCNFSKENNKHVFNVFMEYMSFGNLSQVTCRNGGRLNEAMIGYYTRQIVEGLEYLHSKGVVHCDIKGSNILVCEKGVKIGDFGCAKMVDEIAPVAGTPMYMAPEVARGEEQGYPCDIWSLGCTIVEMATGFSPWSNVDDPVNVLYRVAYSDEVPIIPCFLSEQAKDFLEKCFMRDSKERWSCSELLKHPFLDEFDSSVEKIDEFDSCSPTSILEQGFWNCDEGSESFFFDDLGKTSFVNCPVGRIKKLALCSRDPCWKWGDENWITTRGNDADAGSSISDELDFYELEKSDFSGRISGNYFDYDHSNCKIRDVSFVANGLNFGRGTGRLMPHSTLDFL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03484 403 Pfam Protein kinase domain 7 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03484 403 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Mepo6g03484 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mepo6g03484 403 Gene3D Transferase(Phosphotransferase) domain 1 2 284 - -
Mepo6g03484 403 SMART serkin_6 5 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03484 403 FunFam Mitogen-activated protein kinase kinase kinase 17 4 309 - -
Mepo6g03484 403 ProSiteProfiles Protein kinase domain profile. 5 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03484 403 CDD STKc_MAPKKK 4 256 - -
Mepo6g03484 403 SUPERFAMILY Protein kinase-like (PK-like) 5 269 IPR011009 -
Mepo6g03484 403 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03484 Mepo-Chr6 47014623 47015958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03484 3 284 MAP Kinase Kinase Kinase AT2G32510 53.448 1.51e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo6g03484 Pkinase 4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03484 K20716 - gmx:100797801 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03484 6 47014623 47015958 Mepo6g00936 6 9797325 9799162 ECH
Mepo6g03484 6 47014623 47015958 Mepo6g03484 6 47014623 47015958 ECH
Mepo6g03484 6 47014623 47015958 Mepo2g01541 2 23006427 23013772 PCT