Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03482 ATGGCCAGTGGAGGCCTTGGACTCTCCATTGATTCAGATCCAAATTCAAGCTTCTTATACCATAAGCAAATAGAATTCTCAACTCTTTTCCTCAACACAACAACTACAAAAACTTTAGGTGGAAACATTTATAGTCACAAAATGGATACCACAAACAACAACAAAAACAAAAACAAAAACAAATCTCCATTTCAAGTCAACCATGAAATATCTCATCAACCCTTTGATCATGAAATGAGACCTATCATCAATGAACTAGACTTTTTCTCTCAAAACAAAAACCATCACAACCTTGCATCTGCCTCTACCTCCACACCTCCCTCACTAAATCTTCATCATCATCATCATCATATAAATGATCATTACACCAATCCTTCTCCCTTGGAATTCAAAGTAAACACTAGTTTGAATCTTCTTACCACCAACACAAGCAATGATCAATCCATGATGGAGGAAGACATAGCAAGTAATTCAGAAGACAAAAGAGCTAAGCTTGAGCTCGTTGTTCTTCAAGCCGAGCTTGAGAGAATGAAGGTGGAGAATCATCAACTGAGGAACATGCTTGATGAGGGTAATAGGAAGTACAACACATTGCAGATGCATTGGATGAGTATGGTGCAAGACAAGAAGGTAGAGGATTGTAATGAAGAGCATAAGCAAGTGATTGGTGGAAAACTAGATGAGGAGAAACAAAATGGGAATGGCGGAGTTTTGGTTCCGAGACAATTTATGGAACTTGGATTGGCTGCTAATAATTCTGATGCTACTGATGAACCAAGAAGTCAAGATCAGTCAAAATCACTTGCAAACAACAATGAGGAAGGTTCCAAGGATGAAGAGCTTGTGTCTGACCATGACAAGAAGGAATCTGATCGGGGAAATGAGAGAAACGGTAGTCCTGCAGATCGAGTTTTAGCTGCTAATAATAATAATAATGTTGCAAACTTTAGTCCTCAAACAAATGTTGAACAAGCTGAGGCCACTATGAGGAAAGCAAGGGTTTCAGTTCGAGCTCGATCCGAGGCTAACATGATCAATGATGGATGTCAATGGAGAAAGTATGGACAGAAGATGGCGAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGGCCTTAGGTTGTCCTGTGAGAAAACAGGTACAAAGGTGTGCTGAAGACAAAACAATACTTATCACAACATATGAAGGACACCACATTCATGCTTTGCCTCCAGCAGCAATGGAAATGGTACAAACAACATCATCAGCTGCAAGAATGTTGCTGTCAGGACCAATGACAAGTGCCGATGGACTAATGAACCCAAATTACCTCACAAGAGCAATCCTTCCTTATTCTTCAAGCATAGCAACTATCTCAGCATCAGCTCCATTTCCAACAGTTACATTGGACCTAACTCAGTCGCCAAACCCAAACCAGTTCCCTAATAACCATTCAAACCAGTTCCAATTTCCCTTCCCTCAAAATTTTCTGCCTCAGGTATTCGGTCAGACATTGTTGAACCAATCAAAATTTTCAGGACTTCAAATGTCTCAAGATGCAGCAAACAGTTCTCAGCAGACACCACAGAACCTTGCTGACACAGTTAATGCTATTGCAGCTGATCCTAACTTCACAGCAGCTTTGGCAGCTGCTATTACTTCAATTATTGGGGCTGCACAGCCGAACAATAACAACGGTACTAGCAATAACGGTAACAGTACAATAGCTAATAACAGTAATGGCAATGTTACATCAAGTAACAATACCAATGGAAGCCCTAAAATCAACAATCCCAACTCCTCAGTAGAGTAG 1800 0.4056 MASGGLGLSIDSDPNSSFLYHKQIEFSTLFLNTTTTKTLGGNIYSHKMDTTNNNKNKNKNKSPFQVNHEISHQPFDHEMRPIINELDFFSQNKNHHNLASASTSTPPSLNLHHHHHHINDHYTNPSPLEFKVNTSLNLLTTNTSNDQSMMEEDIASNSEDKRAKLELVVLQAELERMKVENHQLRNMLDEGNRKYNTLQMHWMSMVQDKKVEDCNEEHKQVIGGKLDEEKQNGNGGVLVPRQFMELGLAANNSDATDEPRSQDQSKSLANNNEEGSKDEELVSDHDKKESDRGNERNGSPADRVLAANNNNNVANFSPQTNVEQAEATMRKARVSVRARSEANMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDKTILITTYEGHHIHALPPAAMEMVQTTSSAARMLLSGPMTSADGLMNPNYLTRAILPYSSSIATISASAPFPTVTLDLTQSPNPNQFPNNHSNQFQFPFPQNFLPQVFGQTLLNQSKFSGLQMSQDAANSSQQTPQNLADTVNAIAADPNFTAALAAAITSIIGAAQPNNNNGTSNNGNSTIANNSNGNVTSSNNTNGSPKINNPNSSVE 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03482 599 SUPERFAMILY WRKY DNA-binding domain 338 406 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g03482 599 MobiDBLite consensus disorder prediction 303 324 - -
Mepo6g03482 599 MobiDBLite consensus disorder prediction 252 324 - -
Mepo6g03482 599 SMART WRKY_cls 345 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g03482 599 MobiDBLite consensus disorder prediction 254 271 - -
Mepo6g03482 599 FunFam probable WRKY transcription factor 31 330 407 - -
Mepo6g03482 599 MobiDBLite consensus disorder prediction 558 599 - -
Mepo6g03482 599 MobiDBLite consensus disorder prediction 272 298 - -
Mepo6g03482 599 ProSiteProfiles WRKY domain profile. 340 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g03482 599 Pfam WRKY DNA -binding domain 346 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g03482 599 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 138 565 IPR044810 GO:0003700
Mepo6g03482 599 Coils Coil 160 194 - -
Mepo6g03482 599 Gene3D WRKY domain 330 407 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03482 Mepo-Chr6 46998837 47003218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03482 132 568 WRKY Transcription Factor Family AT1G62300 49.130 4.36e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g03482 WRKY 3.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03482 - - tpra:123897783 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03482 6 46998837 47003218 Mepo6g00939 6 9847089 9850046 ECH
Mepo6g03482 6 46998837 47003218 Mepo6g03482 6 46998837 47003218 ECH
Mepo6g03482 6 46998837 47003218 Mepo2g01543 2 23055477 23058745 PCT