Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03452 ATGGGTTTTTTGTTGAAAGAAGCTTTGAAGACTCTCTGTGGTAGGAATAATCAATGGTCTTATGCTGTTTTTTGGAAGATTGGTTGCAACAATTCTAAGCTATTAATTTGGGAAGAATGCTATTATGAACCCTTTTCATGTCCTTCCCCTCATGACATTGATGGGATGTCGAATTTGCCGAATCCGAACGGGGAAGGGAGTTGGTTTTCATCTGACTTTCAATCGCCTCATCTAGGAATTCAAGAGGATAAAGTCTCTTCTTTGGTTAACAAAATGACAGTAAATAATCTAGTCATTGTTGCAGGTGAAGGTATAATCGGACGCTCGGCATTTACCAACAGTCATGAGTGGATTCTCTTGAACGATTTTGCTAAAAATGCATATCCACCTGAGGTATATGCTGAAATGCATGACCAATTTTCAGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCTCATGGAGTTGTTCAAATTGGTTCTTTCTTGCCTATAATGGAGAATATGGGATTTGTGCATGAAGTAAAGAGCCTTATCTTGCAGCTCGGGTGTATTCCCAATGCCCTTCTATCCGAAGACTATTCTGCCAAACTTTCAAACGAACAACTTGATGGACCTTCTACTTCCGGTGTGCCTTCGTCTGTTGATTCATTTGTCATTACCTCGAATTCCGCTCCTTCAGTAGTCAATGGCTCTAATCACCAGAGTTATTCATCTCATGCTGTGAAGCCTAATGTTCAAACACTCCATCCTTTAAGCGGAGAAATTTGTAATTTTCAGGGTAGAGTTGTTGAGGCTAAAATAATACCCTCAAATTTTGGTTCAAACCTGCAAAAGCATTCAGTTCCTTATAATGCAAGATCTGAATTTAACAACTTTGCTGGTTCTGCGCCGTTTGGTCAATCCGGTCAAAATTTATCTGTAGCTTGGAGTCGTGATCATGTTAAACCTTGTGTTAATGTTTCAAGTTCCTTAAATATTTCTCAACTGAAAACGGACAGAAGCCTTAACTTCGGCCATAATCTGAGTTCTAGCAGTACTTCATTACTTAGAGGAATCCCGGTACATGGTGGAATGAATAGTCTTTTGAGGGCAAATCTGATTACTAGCTCAAAATCACCGAAAGTATCGGCAGCTAATTTATCCGGAGCACAAGTTGGGAATGAACTTCAAAATAAAGATTCAACCTTTATGTTTGCTTCAACAGATCAAAAGATAAACTATGACATGCTTCAGGCTCATAGCATCCCCTCTTTTAATCCCGAGGAGTATGTGCCGAATAGTGGTCATATCCCAGGTTTTGTCCGCGATTGCTTTCAAAAAGATGGTACCATTCAATCTATGATGACAGCGAATCCTAAACATGAAGAAGCTTGTGCTCAACAACCTCCATCAGGTGGTGATGACCTGTTTGATATTTTAGGTGTGGATTTTAAAAACAAACTTCTGAAAGGACACTGGAATGAACTGTTTGCTGATGAATCAGATGGCAATGCAGAAAATAAGGTTAAAAAGGAAACATCTCAGAACAGGGAAGCTACAACTTCTGATTGTTATTACTCAGTTAATGAATCAATGTTGGACAGTGGCATTTTTTCTGGGATGTCAACAGACCACCTCTTGGATGCGGTGGTCTCAACGGCCAAACCGATTTTGAAACAGAATTCTGATGACATGTCTTGCAGAACAACATTGACGGGGAATAGTACCGCCTCTGTTCCCTCTCGTGTCTGTAAGCAGGTTATGTCTAGTAATTTTGAAGGGGGATTGTTTGATTTTTCGAAGCTTGGAAGTAAAATGGGTGCTGTAGAAACTAGTTCTCTAAGGTCTGGTTGTAGCAAGGATGATGGTGGGAAATGCTCTCAAACTACAACTGTATGTGGTTCTCAACTTAGTTCATGGTTGGAGAATGGTGGCAATGTGAAGCATGAAAATAGTGTTTCAACTGGATACTCTAAGCGCCCGGGTGAAGCTTGCAAATCTAATCGCAAAAGGCTCAAACCAGGAGAGAATCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTCAAAGAGTTACGAGAAATTGTTCCAAATGGAGCAAAATGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCATGCCGACAAGCTGAAACAAAACGGGGAGTCTAAGATTATTAGTAAGGAAGGTGGGCTGGTTTTGAAAGACAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCCCAATCAATGGTTTGTCCTATTATAGTTGAAGATTTGAATACTCCTCGTCAGATGCTAATCGAGATGCTTTGCGAGGAACGAGGTTTCTTTCTGGAAATAGCTGACTTAATAAGAGGATTAGGCTTAACCATCTTGAAGGGGGTAATGGAATCTCACAATGACAAAATCTGGGCACGTTTCATTGTTGAGGCAAACAGGGACGTAACGAGGATGGAAATATTTATGTCACTCATTCGTCTTTTGGAGCAAACGATGAAGGGTAATGCATCTTCATCCAATGCAATTGATACCATGTTGCGTTATAACTCGTTACCCCAGAAGGCCTAA 2604 0.409 MGFLLKEALKTLCGRNNQWSYAVFWKIGCNNSKLLIWEECYYEPFSCPSPHDIDGMSNLPNPNGEGSWFSSDFQSPHLGIQEDKVSSLVNKMTVNNLVIVAGEGIIGRSAFTNSHEWILLNDFAKNAYPPEVYAEMHDQFSAGMQTVAVIPVLPHGVVQIGSFLPIMENMGFVHEVKSLILQLGCIPNALLSEDYSAKLSNEQLDGPSTSGVPSSVDSFVITSNSAPSVVNGSNHQSYSSHAVKPNVQTLHPLSGEICNFQGRVVEAKIIPSNFGSNLQKHSVPYNARSEFNNFAGSAPFGQSGQNLSVAWSRDHVKPCVNVSSSLNISQLKTDRSLNFGHNLSSSSTSLLRGIPVHGGMNSLLRANLITSSKSPKVSAANLSGAQVGNELQNKDSTFMFASTDQKINYDMLQAHSIPSFNPEEYVPNSGHIPGFVRDCFQKDGTIQSMMTANPKHEEACAQQPPSGGDDLFDILGVDFKNKLLKGHWNELFADESDGNAENKVKKETSQNREATTSDCYYSVNESMLDSGIFSGMSTDHLLDAVVSTAKPILKQNSDDMSCRTTLTGNSTASVPSRVCKQVMSSNFEGGLFDFSKLGSKMGAVETSSLRSGCSKDDGGKCSQTTTVCGSQLSSWLENGGNVKHENSVSTGYSKRPGEACKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQNGESKIISKEGGLVLKDNFEGGATWAYEVGSQSMVCPIIVEDLNTPRQMLIEMLCEERGFFLEIADLIRGLGLTILKGVMESHNDKIWARFIVEANRDVTRMEIFMSLIRLLEQTMKGNASSSNAIDTMLRYNSLPQKA 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03452 867 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 667 716 IPR011598 GO:0046983
Mepo6g03452 867 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
Mepo6g03452 867 CDD bHLH_AtLHW_like 671 740 - -
Mepo6g03452 867 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 856 IPR043561 GO:0003700|GO:0006355
Mepo6g03452 867 MobiDBLite consensus disorder prediction 658 681 - -
Mepo6g03452 867 MobiDBLite consensus disorder prediction 639 681 - -
Mepo6g03452 867 MobiDBLite consensus disorder prediction 639 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03452 Mepo-Chr6 46639275 46645885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03452 467 864 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.605 5.68e-113 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03452 - - cam:101492357 1270.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03452 6 46639275 46645885 Mepo6g03452 6 46639275 46645885 ECH
Mepo6g03452 6 46639275 46645885 Mepo2g01601 2 23837213 23844683 PCT