Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03448 ATGGGAGTTATGTTGATAGAACAAATTTCCATATTGATGTTTTTTTGTTCAATCATTACTATATGTTATGGTGCTACAAATCCTAATGATCTCAAAGTTTTGAATGATTTTAGAAAAGGGTTGGAAAATCCAGAGCTCTTGAAATGGCCAGAAAAAGGAAACAATGATCCTTGTGGTTCTCCTTCATGGCCTTATGTATTCTGTTCTGATGATAGAGTCACTCAGATTCAAGCTAAGAATCTTGGTCTTAGAGGAACATTGCCACAAAACTTTAACCAACTCTCAGAACTCTACAATTTAGGTCTTCAACGAAACAATCTTACGGGAATGTTGCCTAGTTTTCGTGGTTTATCAAAATTGGAATTCGCTTTCTTGGATTACAATTCATTCGATGCTATCCCTTTTGATTTCTTTGATGGATTAACAAGCCTTAGGGTTTTGTCTTTGGAAGAAAATCAACTCAATGTTAGTACTAATGGATGGTTATTTCCTTTGGATTTGGAAAAATCGGCTCAGTTAACTAATCTTTCCTTGGTTCATTGTAATTTGGTTGGTTCATTGCCTGATTTTCTAGGCACATTGCCATCTCTCAAAAATCTTAGGCTTTCAAACAACAAATTTTCCGGTACAATTCCAGCTACTTTTGCTCAATCTTCAATTCAGGTTTTGTGGTTGAATAATCAAGAAGGAGATGGTGGTTTTACAGGCTCTATTGATGTTATTGCTTCAATGGTTTTCTTAACACAGATTTGGCTACATGGAAACAAGTTTTCAGGTACAATTCCAAACAATATTGGAAATCTTACTTCTTTGAAGGAACTCAATCTCAATAGCAATCAATTTGTTGGGTTGATTCCACAATCCTTAGCTGAAATGAATCTTGATTTACTTGTTTTGAACAATAACATGCTAATGGGTCCAATACCAAAGTTTAAAGCTGCAAACTTTACTTATGATGATAATCTCTTTTGTCAAACTGAGCCAGGACTTGAATGTTCACCAGAAGTTACTGCACTGCTTGATTTTTTGAACAATCTGAATTATCCGCCGTTTCTAATTTCTGATTGGTCAGGTAATAAACCATGCACAAGTAGTACAGGACCATGGTTTGGATTAAGCTGCAATTCAAACTCTGTATCTATAATTAATCTACCAAAGCATAAGCTTAATGGTAGTTTAAGTCCTTCACTTGCTAAGTTGGACTCACTTCTTGAAATTAGGCTTGCTGGAAATAATATAACCGGCGCAGTTCCTAGTGATTTTACTAAATTGAAATCATTGAAGTTGTTGGATTTAAGTGACAATAATCTTGAATCTCCGTTACCGGATTTTCATGATGGTGTGAAGGTTATTACTGCTGGTAACCCATTTCTTAATAATCAAACTGGAGGTAGTGTTAGTCCTACTATCAGTGGCCCAGGTTCCGCAAAAAACCCTTCACATTCTCCATCTTCACTTAATCAGCTAGTTCCAAGCTCAAATCACAAAAGTTTCAAGACAGTAGCAACAGTGGCTGGAGTTGCAGTGTTTGCAGTTGTAGCTTTTGTGGTTGCTTATCTCTTTTTATGTTTCTTTAAGAACAAGAAAACCTCATTGGACGTGCCGAGTTCCATTGTGGTTCACCCTCGAGATCCGTCTGATTCAAACAATGTATTTAAAATTGCTGTTTCAGGCAATAACACTAGAAGCTTATCAGGAAAAACTGGGACAAGTTCTCTGAGTAGCTTAAGTGGTGAAACTCAAAACTTTTACTTTATTGAGTCTGGTAACCATGTTATATCGGTGCAAGTGCTACGCAAGGTTACAAACAATTTTGCATCGGAAAATGAGCTAGGCCGCGGTGGATTTGGAACTGTTTACAAGGGAGAATTAGAAGATGGAACCAATATAGCAGTGAAGAGAATGGAGAATGGAGCTATTGGAAGTAAGGCATTGGATGAGTTTCAATCTGAAATAGATGTTCTTTCTAAGGTTCGTCACCGACATTTGGTATCTCTTTTGGGGTATTCCATTGAAGGAAATGAGAGACTTTTAGTTTATGAGTATATGCCACTTGGGGCTCTAAGTCAGCATCTTTTTCATTGGAAAAAGTTCGACTTAACGCCTTTGTCTTGGTCACAAAGGCTTGTAATAGCACTAGATGTTGCCAGAGGAATGGAATATCTTCACGGTCTTGCTCGCGAGACCTTTATTCATAGAGATCTCAAGTCCTCTAATATTCTACTAGGTGATGATTTTCGTGCAAAAGTTTCGGATTTTGGTCTTGTAAAACTTGCCCCAAATGGTGAAAAATCAGTGGTGACCAAACTTGCTGGAACATTTGGTTATCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACAAAAGTTGATGTGTTCAGCTACGGAGTGGTGTTAATGGAACTTCTAACCGGACTAACAGCACTTGATGAGAGCCGGTCAGAGGAAATCCGATACTTGGCTGAATGGTTTTGGCGAATTAAATCTAACAAAGAAAAGCTTATGGCTGCCCTTGATTCAGCTTTGGAACCAAACGACGAAACACGTGAAAGTATAACTATAGTAGCAGAACTTGCTGGACACTGCACTGCTAGGGAAGCATACCATAGGCCAGATATGAGTCATGCTGTCAATGTACTATCAGCACTAGTGGAGAAATGGCGACCGGTTGACAATGAATTCGATTGCTATTCTGCTGTTGACGATACTCGACAACTTCCTCAATTGTTGAAAATTTGGAAGGATGCAGAATGCAGTGAGTTTAGCTATAGTGCTGCTAGTCTTGAAGACAGTAAAGGAAGTATTGCAGTGAGGCCTACTGGATTTGCCGACTCTTTCACTTCTGCTGATGCTAGATGA 2862 0.3836 MGVMLIEQISILMFFCSIITICYGATNPNDLKVLNDFRKGLENPELLKWPEKGNNDPCGSPSWPYVFCSDDRVTQIQAKNLGLRGTLPQNFNQLSELYNLGLQRNNLTGMLPSFRGLSKLEFAFLDYNSFDAIPFDFFDGLTSLRVLSLEENQLNVSTNGWLFPLDLEKSAQLTNLSLVHCNLVGSLPDFLGTLPSLKNLRLSNNKFSGTIPATFAQSSIQVLWLNNQEGDGGFTGSIDVIASMVFLTQIWLHGNKFSGTIPNNIGNLTSLKELNLNSNQFVGLIPQSLAEMNLDLLVLNNNMLMGPIPKFKAANFTYDDNLFCQTEPGLECSPEVTALLDFLNNLNYPPFLISDWSGNKPCTSSTGPWFGLSCNSNSVSIINLPKHKLNGSLSPSLAKLDSLLEIRLAGNNITGAVPSDFTKLKSLKLLDLSDNNLESPLPDFHDGVKVITAGNPFLNNQTGGSVSPTISGPGSAKNPSHSPSSLNQLVPSSNHKSFKTVATVAGVAVFAVVAFVVAYLFLCFFKNKKTSLDVPSSIVVHPRDPSDSNNVFKIAVSGNNTRSLSGKTGTSSLSSLSGETQNFYFIESGNHVISVQVLRKVTNNFASENELGRGGFGTVYKGELEDGTNIAVKRMENGAIGSKALDEFQSEIDVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSQHLFHWKKFDLTPLSWSQRLVIALDVARGMEYLHGLARETFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPNGEKSVVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLTALDESRSEEIRYLAEWFWRIKSNKEKLMAALDSALEPNDETRESITIVAELAGHCTAREAYHRPDMSHAVNVLSALVEKWRPVDNEFDCYSAVDDTRQLPQLLKIWKDAECSEFSYSAASLEDSKGSIAVRPTGFADSFTSADAR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03448 953 FunFam receptor protein kinase TMK1 567 682 - -
Mepo6g03448 953 FunFam Receptor-like kinase TMK4 28 329 - -
Mepo6g03448 953 Pfam Protein tyrosine and serine/threonine kinase 608 879 IPR001245 GO:0004672|GO:0006468
Mepo6g03448 953 PANTHER OSJNBA0070M12.3 PROTEIN 13 953 - -
Mepo6g03448 953 CDD STKc_IRAK 611 881 - -
Mepo6g03448 953 ProSiteProfiles Protein kinase domain profile. 605 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03448 953 SUPERFAMILY Protein kinase-like (PK-like) 582 881 IPR011009 -
Mepo6g03448 953 SUPERFAMILY L domain-like 26 311 - -
Mepo6g03448 953 SMART serkin_6 605 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03448 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Mepo6g03448 953 Gene3D Ribonuclease Inhibitor 334 462 IPR032675 -
Mepo6g03448 953 FunFam Leucine-rich repeat receptor-like kinase 334 461 - -
Mepo6g03448 953 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Mepo6g03448 953 SUPERFAMILY L domain-like 334 444 - -
Mepo6g03448 953 MobiDBLite consensus disorder prediction 459 489 - -
Mepo6g03448 953 Pfam Leucine rich repeat N-terminal domain 334 375 IPR013210 -
Mepo6g03448 953 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Mepo6g03448 953 FunFam receptor protein kinase TMK1 683 900 - -
Mepo6g03448 953 SMART LRR_typ_2 194 217 IPR003591 -
Mepo6g03448 953 SMART LRR_typ_2 117 140 IPR003591 -
Mepo6g03448 953 SMART LRR_typ_2 400 423 IPR003591 -
Mepo6g03448 953 SMART LRR_typ_2 268 291 IPR003591 -
Mepo6g03448 953 SMART LRR_typ_2 141 164 IPR003591 -
Mepo6g03448 953 SMART LRR_typ_2 424 446 IPR003591 -
Mepo6g03448 953 SMART LRR_typ_2 94 116 IPR003591 -
Mepo6g03448 953 Gene3D Phosphorylase Kinase; domain 1 567 682 - -
Mepo6g03448 953 Gene3D Transferase(Phosphotransferase) domain 1 683 901 - -
Mepo6g03448 953 Gene3D Ribonuclease Inhibitor 28 329 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03448 Mepo-Chr6 46611886 46615709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03448 85 874 Receptor kinase-like Gene Family AT1G55610 29.965 4.03e-79 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mepo6g03448 PK_Tyr_Ser-Thr 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03448 - - cam:101493565 1553.88