Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03444 ATGGCAAACAAGTTCACCCCCATTTCAGCCATCTCTGGTGGTAAGAAAGATTTAAAGTTGATTGTTCGTGTTGCTCATATTTGGCTAATTCGTGACAAGGAAAATCCAGATGACATAATTTTCATGAACATGATGCTGGTTGATGATAAGCGAGGAAGGATACATGCTACTGTTCGTAAATACTTGGTGCCAAGTATTCAAAAAATGGTCGAAGAAGGCGACACTTATAAGCTAGAGAATGTAATGGTTGGATTTAACGAGGGGCAGTACAAGCTTTTGCCTCACAAGCACAAGCTTAGCATGATGAACAATTCCAGATTTGTTAAGGTGAATGCACCCAATATTCCTCTGAACGTCTTTGAGTTTATGGCCTTCAAAGACATTTTACTTTCTCAAGAGGATGATAAAGTTGCTGATGTAATCGGTCATGTCGTTGAGAGGGATATTTTAAGGGAAACCGAAAAGAATGGAAGAAAAAGCATAGTAATTGATCTTACGCTAGAAGATTTGGAACACTCTAGGATTCATTGCTCCCTTTGGGGTGAATTTGCAACTGATATTGATAAGTATTTTGATGCTCAAGATAACTCTAAGCCTATTGTATTGATAATACAACTTGGCCGATTGAGGAAGTATATGGGTGCCATGGGGATCGCGAATTCATTTTATGGCTCAAAGGTCATAATAAATGGTGATCTTCCTGAGGTTTCTGACTACATTAAAAGGATGGGGAATGTTGATGTTGAACTAACACAAAGTGTTAGTCAGATGTCCTCATACAGTGCACGCCCTGTCGCTGAGGAGCTTCTTGATTGCAATCGAATGACAATCGAGGATCTTATAGAGTCCAAAGCGGCATGTAATGGATCAGTACTTGCTACCATATGTGAGATTGAAACCGGTGTCGAGTGGTTTTTCCGTTCATGCACTGTGTGTGCGTCGTTAGTCAGCCTGATTGATGGAAAACTTAGTTGCAAACGATGCAAGGAGTGCAAAAGTGCCGTTCCAAGGTTCAAGCTGCATTTAATTGTCATGGATGAGAGTGGGTCGACAACGTTTGTCCTCTTTGATCGTGTTGTCACACAATTCATTGGAAGGAACGTCCAAGACTTGATTGCAGAAATGAACAAGCCTGACAACAAAGATGTGTATCCGCTTGAGTTCAACTTCTTTGTGGACAAAAAAATGTTGTTTAAGGTGGAAGTTAGTGATGGCAAAGTCAATAGGAAGTGGAGAAACTATGGAGTGAAAAAAGCTACTGATGATGTTGAAATCATTGATGAGTTTATCAAGAAGTATAGTAGTAAGGAAATATTGGAGTTAGGTGATTCTGTCAGCAATTCTAACAAGCTAGACACTCCATCAAGCAAATCAGGAACAAAGAGATCATCTGATGGTCATAATTCACCTGGACTTAGTAGCCTTGAAATCGGAGAGCAATCTATAAACAAGCCAACAAAGATGGTCCGTGTGAAGAGCCAAATTTTATCAGCAAAAAAATACCCAGCTGCAAGAACGCGTGCACCAGCAATGTTGGATCTCAAGTCTGCCAAATATCTTACTGATTTCGCTATGTACTCATGCCAAGATGTTGCACTATGGGAGTATCATGTTGAAGATCCTGCATTTATGCAGCTGTTGAAGATAAAATGGCGCACCTATCATGTACAGTACCACCCACATGAGGAATATTTGATTTTGGGCACAGCTCTCACAAAAGAAATCGGCAATGAGTTGAATCGATATGTTACTTTGGTCGATGCAGCACTCAATCAATTTGAGGTTGTTGTGGATAAACACGACGGAAAGCTATGTTTCACTTATGGTTTAGAAGAACTGAACAAGGCTTATAAATTAGACCAGGGCGGATGGATGTATTTGATCCATGTTCTACCACAAGTATTTGTGATTCGCGTTTACGACCGCCATGATTATGAGATTAACTATTCGATGTTTGATCCTCCTTTGAGTTTAAGACTAGACCATGCAATCTATGGTCCAGATGCATCACCAGGATCTATCCAAATTGAGGTGCCGATCCCTTATCGCCACGGCTGGAACTGCTTTAAATTTAGTGTCACTAAATGGTTGACATCTGCAGATGTTACATCTGATTATTTGACTTTCTCTTATGCCAAAGTATTTGATAGATACGTCCACAAAGATTGCAAAGACATTGGTGTTATCGACGATACAGGGCATTACTGGCTGTTCAAGGTAGAGATTCTTTTTGACAATGACGAAATCAAGTTTGGAGGAGATTGGAAGAAATTTCGTGTCACAAGGAAGCTTAACGAGTGGAAGGGAATAAGACTTGGAGCAAAAGGCGTCGGTCACAATGTTTTGCTCTACTGCACGTTTGATTTTTAA 2370 0.4021 MANKFTPISAISGGKKDLKLIVRVAHIWLIRDKENPDDIIFMNMMLVDDKRGRIHATVRKYLVPSIQKMVEEGDTYKLENVMVGFNEGQYKLLPHKHKLSMMNNSRFVKVNAPNIPLNVFEFMAFKDILLSQEDDKVADVIGHVVERDILRETEKNGRKSIVIDLTLEDLEHSRIHCSLWGEFATDIDKYFDAQDNSKPIVLIIQLGRLRKYMGAMGIANSFYGSKVIINGDLPEVSDYIKRMGNVDVELTQSVSQMSSYSARPVAEELLDCNRMTIEDLIESKAACNGSVLATICEIETGVEWFFRSCTVCASLVSLIDGKLSCKRCKECKSAVPRFKLHLIVMDESGSTTFVLFDRVVTQFIGRNVQDLIAEMNKPDNKDVYPLEFNFFVDKKMLFKVEVSDGKVNRKWRNYGVKKATDDVEIIDEFIKKYSSKEILELGDSVSNSNKLDTPSSKSGTKRSSDGHNSPGLSSLEIGEQSINKPTKMVRVKSQILSAKKYPAARTRAPAMLDLKSAKYLTDFAMYSCQDVALWEYHVEDPAFMQLLKIKWRTYHVQYHPHEEYLILGTALTKEIGNELNRYVTLVDAALNQFEVVVDKHDGKLCFTYGLEELNKAYKLDQGGWMYLIHVLPQVFVIRVYDRHDYEINYSMFDPPLSLRLDHAIYGPDASPGSIQIEVPIPYRHGWNCFKFSVTKWLTSADVTSDYLTFSYAKVFDRYVHKDCKDIGVIDDTGHYWLFKVEILFDNDEIKFGGDWKKFRVTRKLNEWKGIRLGAKGVGHNVLLYCTFDF 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03444 789 Gene3D - 255 433 IPR012340 -
Mepo6g03444 789 PANTHER OS03G0429900 PROTEIN 5 500 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo6g03444 789 Gene3D - 2 109 IPR012340 -
Mepo6g03444 789 SUPERFAMILY Nucleic acid-binding proteins 120 243 IPR012340 -
Mepo6g03444 789 CDD RPA1_DBD_A_like 19 107 - -
Mepo6g03444 789 Pfam Domain of unknown function DUF223 44 129 IPR003871 -
Mepo6g03444 789 Gene3D - 113 249 IPR012340 -
Mepo6g03444 789 MobiDBLite consensus disorder prediction 447 477 - -
Mepo6g03444 789 SUPERFAMILY Nucleic acid-binding proteins 4 109 IPR012340 -
Mepo6g03444 789 CDD RPA1_DBD_C 290 423 IPR047192 -
Mepo6g03444 789 CDD RPA1_DBD_B_like 139 243 - -
Mepo6g03444 789 SUPERFAMILY Nucleic acid-binding proteins 273 420 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03444 Mepo-Chr6 46584158 46589390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03444 1 412 Core DNA Replication Machinery Family AT5G08020 20.843 5.04e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03444 - - mtr:120577762 581.252