LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g03441	ATGGTGTCTAAGATGGATCAGTACGAGATCATGGAACAGATCGGTCGCGGTGCATTTGGTGCTGCAATTCTCGTTAATCACAAGGTGGAGAAGAAACGATATGTGTTGAAGAAAATTAGGCTTGCAAGGCAAACGGAACGGTGTAGAAGATCTGCTCATCAAGAGATGGCTCTAATTGCGAGAATTAAGCATCCTTACATTGTTGAATTCAAAGAGGCTTGGGTTGAGAAGGGTTGCTATGTTTGCATTGTTACTGGATACTGTGAAGGTGGAGACATAGCAGCATTGATGAAAAAATCAAACGGGGCTTACTTTCCTGAAGAGAAACTCTGCAAATGGGTTACTCAATTACTGTTGGCAGTAGAATACCTGCATTCAAATTTTGTTTTGCACCGTGACCTAAAGTGTTCTAACATCTTTCTTACCAAGGATCATGATGTTCGCTTAGGGGATTTTGGGCTTGCTAAGACACTAAAAGCAGATGATTTGACCTCTTCGGTTGTAGGAACTCCCAACTATATGTGCCCTGAACTGCTTACAGATATTCCTTATGGATTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCACCGCCCTGCCTTCAAAGCTTTTGATTTGGATGGATTGATAAGCAAGATCAACCGTTCCTCTATTGGTACTTTGCCTCCCTGTTATTCTCCATCCTTGAAAACACTGATAAAAGGCATGTTGAGGAAAAACCCCGAGCAGCGTCCAACAGCATCCGATATCTTAAAGCACCCTTATTTGCAGCCTTATGTTCATCAATATTGTTCATCTCTCTGTTCTCCATCAGCCTCTTCTCCTGAAAAGCCAATTTTTGCTGTCCATGTTCCTCGAAAAAATATGGCAGAAAGTGAAAAAAGTAATAGTTCAAGTAGTGACAAAGGTGGTTTGATGTCAAATAAGAGAAACATTTCAAAAGCAGCACCAAAGGGCAATGACAAAACCACTGAGGTAGACCTGTCATCGATCGATGATAATGGGTCTGACCTTATCATGCCCGGTAGAGAAAGAAATAGCTCTAGCAATGTCAATGCCAAAACAGATAAACAGGAGGTTAGGAAGCAAACTCACCTTGAACACAATTCTAATGTTGGATTTAAGCAAGCAAGAACAGTTAAGAATGTAATGATGGCACAAAAACATGAAAAGGTTAAAGAGACGAGTTCTCCAATGAGAGGGAGTCTGATGAAGGCTGGTGGTATATCAACACAGAAAATTAATACAGAGACCTTGTCTAAATTTCTGAAATCCGATTTTGGTGTTAATGGTGTGAAGCCTAATGTAGAGGTGCCAACTTTAGCACCTTCAAAATCAACCCTTCATTCTGCAAAACGAATCCAGGGATCACATGCTTCAAAACATCAGTTACGGATAATAGAATCTGCACCAAAAACTAAACCTCGACATAAGGTGACACCACTGTGTGGTCCTATCAAACAAGTAGTAGCAGAACCTGGAGTTTCTGCACGGCCAAAACAAAAGACTCCTCCAAGCCTACTTAAGCCACCCTCGTCTCTGGGACGCAAAAAGCAAGCCGGGCATGATATGCCAAATGCAGCAAATGATACAGAAAGGTTTGGTCCAAATAAAATAGCTCAGGAGGTTAGGATGAGACATGATCAGTTGCCTAACAGTCATCTGCAACATGTTTCTAGAGAGCCTTTGAAGGCTTTTGAAAGTAGTACCAAAGGAATGCAAGCAAACAGCAACATTTCTGTTTCATCTTCGGTCTCTATTCAAGGATTTGAACTTTTTGACTTTGCACACACTTTTATTGACTTGAGTGAACCAACACCCCCTGAACATGGGAGTTTTAATCACACTCAAAATGTGGGATCACGTACCAACAGTAGTGGACCTGATGAAAATATTTCTGGTGAATCCTCTCCGTTTACACCAACTTTTCAGAATACCATTACTCGTAATGAGAAAGTAAGTCCCAGGTTAACTCTGGATCACTCAGTAATGTATGATAGTTTTCTTATAAATCAAACAACTACATCTGATGCCGGTGAGTGTGATGTTCCGTCAGACAAAGTCACACAAGAAATCAAAGACCTTCAAGATATTTGTAAGGAAATGGCTTCAATCAATTCTCTCAAACATTCATTTTCCGGAAAAAAGTCTGTTTGTAAGGTTAATCCAGTAAGCTTGCCAAATAATAGGCCTCATAAAGTTAGCCAGCCAAAGCTTATGCGCATCTCAACTGGTGATGACAAATTCATGGCGAGGGAAAGAGTGTCCTCGGTGGCTGAAATTTCCCCTCTGAATATATCTACTAAAATTTCAAGCCAAAAACTTTTACAAGAAGAGAAGGGAATGGTTTTACAGAATCTAGCAACAGAAAGACCAGCTTCTGGCCATCTTCCCCCAGCTTTTGATGATGTCATTCATGTTATACGCCATAGTAGTTACCGGGTAGGGAGTGATCTTCCAGTAGTGGAATCAACGGAGAAGGGAGTTACAAATGTAGATGTTGGTACACTCATCAACGTTGTAAAGGATGATTTAGAAATGAGAAATGCGGGAACCCCTTTGTCCCTTAAATCTTCAAATTGCTCTGAAGTTACTAGCTTGAACTCAAATACTACTGATACTTTGGAAATCAGAAACTTGAGCTTGAAGTCAAGTATTTCTGAACATCCTGATTTTGAAGAGCAAGATGTGAGAATCCCTGATTCTCTAGTTTCAGAACCTGATTCCGCTAAATATAACAAATATAGCATTCCTACAGCCAAAGAAGAAATTCCAGGAAATGAATCTTTGGATGTTAAATCTTCCAAACAGAGAGCTGATGCACTTGAAGGGCTGTTGGAATTGTCTGCAGATTTGCTGCAACAAAATAGATTGGAGGAACTTGAGGTTGTTCTGAAGCCCTTTGGAAAAGATAAGGTCTCCTCGAGGGAGACAGCTATTTGGTTGGCCAAGAGTCTAAAAGGATTGATGGTTGAGGAAAGTGGGGGACGTAGTTAG	3015	0.4066	MVSKMDQYEIMEQIGRGAFGAAILVNHKVEKKRYVLKKIRLARQTERCRRSAHQEMALIARIKHPYIVEFKEAWVEKGCYVCIVTGYCEGGDIAALMKKSNGAYFPEEKLCKWVTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDLDGLISKINRSSIGTLPPCYSPSLKTLIKGMLRKNPEQRPTASDILKHPYLQPYVHQYCSSLCSPSASSPEKPIFAVHVPRKNMAESEKSNSSSSDKGGLMSNKRNISKAAPKGNDKTTEVDLSSIDDNGSDLIMPGRERNSSSNVNAKTDKQEVRKQTHLEHNSNVGFKQARTVKNVMMAQKHEKVKETSSPMRGSLMKAGGISTQKINTETLSKFLKSDFGVNGVKPNVEVPTLAPSKSTLHSAKRIQGSHASKHQLRIIESAPKTKPRHKVTPLCGPIKQVVAEPGVSARPKQKTPPSLLKPPSSLGRKKQAGHDMPNAANDTERFGPNKIAQEVRMRHDQLPNSHLQHVSREPLKAFESSTKGMQANSNISVSSSVSIQGFELFDFAHTFIDLSEPTPPEHGSFNHTQNVGSRTNSSGPDENISGESSPFTPTFQNTITRNEKVSPRLTLDHSVMYDSFLINQTTTSDAGECDVPSDKVTQEIKDLQDICKEMASINSLKHSFSGKKSVCKVNPVSLPNNRPHKVSQPKLMRISTGDDKFMARERVSSVAEISPLNISTKISSQKLLQEEKGMVLQNLATERPASGHLPPAFDDVIHVIRHSSYRVGSDLPVVESTEKGVTNVDVGTLINVVKDDLEMRNAGTPLSLKSSNCSEVTSLNSNTTDTLEIRNLSLKSSISEHPDFEEQDVRIPDSLVSEPDSAKYNKYSIPTAKEEIPGNESLDVKSSKQRADALEGLLELSADLLQQNRLEELEVVLKPFGKDKVSSRETAIWLAKSLKGLMVEESGGRS	1004

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g03441	1004	MobiDBLite	consensus disorder prediction	292	372	-	-
	Mepo6g03441	1004	SMART	serkin_6	8	262	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03441	1004	MobiDBLite	consensus disorder prediction	498	540	-	-
	Mepo6g03441	1004	SUPERFAMILY	Protein kinase-like (PK-like)	5	304	IPR011009	-
	Mepo6g03441	1004	MobiDBLite	consensus disorder prediction	610	649	-	-
	Mepo6g03441	1004	ProSitePatterns	Protein kinases ATP-binding region signature.	14	37	IPR017441	GO:0005524
	Mepo6g03441	1004	Gene3D	Phosphorylase Kinase; domain 1	1	87	-	-
	Mepo6g03441	1004	ProSiteProfiles	Protein kinase domain profile.	8	262	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g03441	1004	CDD	STKc_Nek	7	262	-	-
	Mepo6g03441	1004	FunFam	Serine/threonine-protein kinase Nek2	5	87	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g03441	Mepo-Chr6	46553449	46560761	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g03441	14	263	MAP Kinase Kinase Kinase	AT1G53570	31.765	3.96e-35	139

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NEK	Mepo6g03441		Pkinase	1.1e-64	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g03441	K08857		-	gmx:100780141	1299.26

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo6g03441	6	46553449	46560761	Mepo6g03441	6	46553449	46560761	ECH
	Mepo6g03441	6	46553449	46560761	Mepo2g01615	2	23962137	23967785	PCT

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