Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03434 ATGGAGATAGTTGTTTCAAAGGAAGCTCAGATGTCTATTGCTGCTTCATCTATGTTTCCTGGTTTTAGATTCTGTCCTACTGATGAAGAGTTGATTTCTTATTACCTTAGAAAAAAATTGGATGGTCATGAAGAAAGTGTTCAAGTTATTTCTGAGGTTGAGCTTTGTAAATATGAACCTTGGGATTTACCAGCGAAATCATTCATTCAATCAGATAACGAATGGTTCTTCTTCTCTCCTCGTGGAAGAAAGTATCCAAATGGTTCACAAAGTAAAAGAGCTACTGACTGTGGCTATTGGAAAGCCACCGGAAAAGAGCGCAACGTGAAATCGGGTTCTAATGTCATAGGTACGAAGCGAACTTTGGTGTTTCACTTAGGTCGTGCCCCTAAAGGAGAAAGGACAGAATGGATTATGCACGAGTACTGTGTCAGTGACAGGTCTCCGGATTCTTTGGTTGTTTGTCGTCTCAAGAGGAACACAGAGTTTCGCGTTAACGATGCTTCAAATAGAGCTTCTTCAAGTCAAATAAACCCAGTACATTCACATGAAAGTGATTGTGCTGGTCAAATAAACCCAGTAAATTCACATGAAAGTGATTGTGCTATCTCAGAAGGCGGTACTGATCATAGAGAAAGGGGTGTCTGTGAACAAGAAAAGGAGGTTGATGGTAGTTCCAAACGGGGAAGCAGCAGTTATGGTTCCGCTTCAATGGAACAAATCGATTCTGTGTCTGAATCAAATCAGCGACCAGCTAATGACGGTTTTTTGACAGACTCTTCGGGCCAGCTGAAGATGGATGAAGAGGATTGTTATGCTGAGATACTAAGGAATGATATCATAAAATTAGATGAATCATCAATGTCTCAAGGAACTCAAACAAGACCAAATAACCTTGCACATTCTCATCCATGCCAAGGCACTGCACAACGGAGAATACGATTAAGGGTTCCGAAATCAACGCATTCTCAACCAGGAGCTCGTTTCTCAAAAACAATGCACCAGTCCAAGAGTAGCTTCTTTGCCAGAATGACGAACCATTTGATGATATTTGCTTTCTTCGTTTTCACTCTCACGGCTATATTATTTTGGTCTTCATTGGGCGGTCACAAACAAGTCAGAAATATTGTAGGAAAATTTCAGGTGTAA 1149 0.4073 MEIVVSKEAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATDCGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCVSDRSPDSLVVCRLKRNTEFRVNDASNRASSSQINPVHSHESDCAGQINPVNSHESDCAISEGGTDHRERGVCEQEKEVDGSSKRGSSSYGSASMEQIDSVSESNQRPANDGFLTDSSGQLKMDEEDCYAEILRNDIIKLDESSMSQGTQTRPNNLAHSHPCQGTAQRRIRLRVPKSTHSQPGARFSKTMHQSKSSFFARMTNHLMIFAFFVFTLTAILFWSSLGGHKQVRNIVGKFQV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03434 382 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Mepo6g03434 382 Gene3D NAC domain 27 165 IPR036093 GO:0003677|GO:0006355
Mepo6g03434 382 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 245 - -
Mepo6g03434 382 MobiDBLite consensus disorder prediction 227 260 - -
Mepo6g03434 382 MobiDBLite consensus disorder prediction 203 226 - -
Mepo6g03434 382 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Mepo6g03434 382 MobiDBLite consensus disorder prediction 167 202 - -
Mepo6g03434 382 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Mepo6g03434 382 MobiDBLite consensus disorder prediction 167 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03434 Mepo-Chr6 46482966 46485845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03434 5 301 NAC Transcription Factor Family AT2G27300 48.148 2.42e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo6g03434 NAM 7.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03434 - - mtr:11413720 767.303