Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03423 ATGGAGGATTCCCCACCTGGTTTTCGTTTCTACCCAACAGAAGAAGAGCTAGTTGGCTTCTATCTACACCACCATCTGGAAGGACAAAAGCATGAAGACATAAACAAAATCATACCTATCATTGATATCAATGGCAAAGAGCCATGGAACCTTCCAACATTTGCAGGGGAGAGATGTCGTGGAGACACAGAGCAATGGTTTTTCTTTTCACCAAGACAAGAGAGAGAGTTGAGAGGTGGAAGACCAAATAGAACAACATCTTGTGGGTATTGGAAAGCTACGGGTTCTCCTAGCTATGTTTACTCTTCTAACAACAAAGTCATTGGAATAAGGAAAACCATGGTGTTTTACATAGGAAAAGCTCCATCTGGAAGGAAAACCAAATGGAAGATGCATGAATATAAAGCCATTGAACAATCTGACCCATCCAATACAAATCCTCCAAAGCTGCGGCACGAATTCAGCTTGTGTCGCGTTTATGTGATATCGGGAAGCTTTAGTTCATTTGATCGAAGACCATTAGAGAGGCCAGCGGCGGAGTTACAAAATGCTGCTTCAACAAGTGCTCAACAAGTGGTGGCAGAGCTCGATGGAGGGATAGAGAGAGACCATGATGCTTCTCTTAATATTGGAGGGTCAAGTGGCACAAATTGGAATGATGTACCAAATAATGGGGTAGATGAACCTGAACCTATTTGGGAATGGGAACAACTAAATTGGATCTAA 726 0.4256 MEDSPPGFRFYPTEEELVGFYLHHHLEGQKHEDINKIIPIIDINGKEPWNLPTFAGERCRGDTEQWFFFSPRQERELRGGRPNRTTSCGYWKATGSPSYVYSSNNKVIGIRKTMVFYIGKAPSGRKTKWKMHEYKAIEQSDPSNTNPPKLRHEFSLCRVYVISGSFSSFDRRPLERPAAELQNAASTSAQQVVAELDGGIERDHDASLNIGGSSGTNWNDVPNNGVDEPEPIWEWEQLNWI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03423 241 ProSiteProfiles NAC domain profile. 4 162 IPR003441 GO:0003677|GO:0006355
Mepo6g03423 241 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Mepo6g03423 241 Gene3D NAC domain 13 165 IPR036093 GO:0003677|GO:0006355
Mepo6g03423 241 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Mepo6g03423 241 MobiDBLite consensus disorder prediction 210 229 - -
Mepo6g03423 241 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03423 Mepo-Chr6 46399966 46401727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03423 7 240 NAC Transcription Factor Family AT5G22380 53.846 3.84e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo6g03423 NAM 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03423 - - gmx:100784960 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03423 6 46399966 46401727 Mepo2g01658 2 24475128 24477118 PCT