Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03417 ATGGCACCGAAGAAGGCAGCACCACCACCGTCATCAAAGCCAGCGAAATCAGGAGGAGGAAAGCAAAAGAAGAAGAAATGGAGCAAAGGTAAACAAAAGGAAAAGGTTAACAACATGGTTTTGTTTGATCAAGGTACCTATGATAAGCTTCTCACTGAAGCTCCCAAATACAAACTCATCACTCCTTCAGTCCTCTCCGATCGTCTCAGGATTAATGGATCTTTGGCACGTCGTGCAATCAGAGATTTGATGGCAAAAGGATTGATTAGGTTGGTGTCTGCTCATTCTAGTCAGCAGATTTACACTAGAGCCACTAATACATAG 324 0.4321 MAPKKAAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKYKLITPSVLSDRLRINGSLARRAIRDLMAKGLIRLVSAHSSQQIYTRATNT 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03417 107 FunFam 40S ribosomal protein S25 20 107 - -
Mepo6g03417 107 Pfam S25 ribosomal protein 10 104 IPR004977 -
Mepo6g03417 107 Gene3D - 20 107 - -
Mepo6g03417 107 PANTHER 40S RIBOSOMAL PROTEIN S25 1 107 IPR004977 -
Mepo6g03417 107 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03417 Mepo-Chr6 46367108 46367854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03417 1 107 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 88.889 5.48e-53 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03417 K02975 - ming:122063087 157.532