Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03405 ATGGCGAGCCAAAGAATAGGAGAACTTGATTTTTCTGAGACAGGACATTCAACTCATCATGTCCCTTATGGAATTCATCATAGGATTAATAATCCTTCATCAAGCTTAATGAATGAAGAATCTGGTTTTGATTTTGGGGAGCTAGAAGAAGCAATTGTTTTGCAAGGAGTTAAGAATGGAAATGATGAAACAAAAGCATCTTTTTTCACAGCCAGACCTGCTGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCATCAAACCTCAACAGGAGGTGGTAACAAATCAGGAGGGGAAAGCAGTGATTCAGCACTATCAAGCAAAAATGAGAACCCTTTTGAGCCAGAATCACCCTTAAGTAAAAAAGCATCTTCTTTTTCATCAGATCATAATAATAATATTGATCAACAGAATCTTCAGCTTCAACAACAAAAGATGATAGTATCAAATGATGCTTCTGCTGCTATAAGAACAGCCTCTTCATCACAGAATCAAATATCAGCAGCAGCCAAAGAAAAGAAAAAAGGAGCTGGTTCAACATCTGATAAGCCACTTGATGCAAAGACATTGAGACGTTTAGCACAAAACAGGGAGGCTGCAAGAAAAAGTCGTCTAAGGAAAAAGGCTTATGTGCAGCAACTTGAGTCAAGTAGATTAAAGCTTACACAATTGGAACAAGACCTTCAAAGAGCACGCTCTCAGGGTATGTTCATGGATTGGAGTGGAGGTGTTGGAGGCAATATAAGCTCTGGAGGTGCAATGTTTGACATGGAATATGGAAGATGGTTAGAAGAAGACAACCGTTTATTAACGGAGTTAAGAAACGGATTGCAAACGGCGTTAACAGATAATGAAATGAGAGTAATGGTGGATGGATATTTGTGTCATTATGATCAAATATTTAGACTCAAAGGTGTCACTGCTAAATCAGACGTGTTTCATCTTATCAATGGCATGTGGACTTCTCAAGCTGAACGTTGCTTTCTTTGGATTGGTGGTTTTAGACCTTCTGAGATTATCATGATGTTGATCCAACAATTGGAGCCACTAGCTGAGCAGCAGATAATGGGGATGTATGGACTGAGGCATTCTTCACAACAAGCAGAGGAAGCTCTCTCACAAGGACTTGACCAGTTGCAACAGTCTCTTGTTGACACCATTGCTGGAGGACCCCTTGTTGATGGTGTTCAACAAATGGTTGTTGCTATAGGCAAGCTTGCCAATCTTGAAGGTTTTCTTCGTCAGGCCGATAACTTGAGGCAACAAACTCTTCACCAATTATGTCGATTACTCACACTTCGTCAAGCGGCACGCTCTTTTCTTGTTATTGGAGAATATTATGGACGACTTCGAGCTCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGAACATGATCAGTGATGATAACTCATGCCAAACAACCACGGACATGCAAATGGTTCAACCTTCTCAGAATCATTTCACAAATTTCTGA 1482 0.4049 MASQRIGELDFSETGHSTHHVPYGIHHRINNPSSSLMNEESGFDFGELEEAIVLQGVKNGNDETKASFFTARPAATLEMFPSWPMRFHQTSTGGGNKSGGESSDSALSSKNENPFEPESPLSKKASSFSSDHNNNIDQQNLQLQQQKMIVSNDASAAIRTASSSQNQISAAAKEKKKGAGSTSDKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGMFMDWSGGVGGNISSGGAMFDMEYGRWLEEDNRLLTELRNGLQTALTDNEMRVMVDGYLCHYDQIFRLKGVTAKSDVFHLINGMWTSQAERCFLWIGGFRPSEIIMMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQQSLVDTIAGGPLVDGVQQMVVAIGKLANLEGFLRQADNLRQQTLHQLCRLLTLRQAARSFLVIGEYYGRLRALSSLWASRPRENMISDDNSCQTTTDMQMVQPSQNHFTNF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03405 493 Coils Coil 209 236 - -
Mepo6g03405 493 MobiDBLite consensus disorder prediction 160 192 - -
Mepo6g03405 493 FunFam BZIP family transcription factor 189 238 - -
Mepo6g03405 493 SMART brlzneu 186 278 IPR004827 GO:0003700|GO:0006355
Mepo6g03405 493 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 193 208 IPR004827 GO:0003700|GO:0006355
Mepo6g03405 493 Pfam Seed dormancy control 272 345 IPR025422 GO:0006351|GO:0043565
Mepo6g03405 493 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 232 IPR004827 GO:0003700|GO:0006355
Mepo6g03405 493 MobiDBLite consensus disorder prediction 85 135 - -
Mepo6g03405 493 CDD bZIP_HBP1b-like 190 240 - -
Mepo6g03405 493 PANTHER TRANSCRIPTION FACTOR TGA9 126 465 - -
Mepo6g03405 493 Pfam bZIP transcription factor 189 231 IPR004827 GO:0003700|GO:0006355
Mepo6g03405 493 SUPERFAMILY Leucine zipper domain 190 232 IPR046347 GO:0003700|GO:0006355
Mepo6g03405 493 ProSiteProfiles DOG1 domain profile. 254 462 IPR025422 GO:0006351|GO:0043565
Mepo6g03405 493 Gene3D - 189 238 - -
Mepo6g03405 493 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03405 Mepo-Chr6 46265464 46272138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03405 138 493 bZIP Transcription Factor Family AT1G08320 66.011 1.30e-176 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo6g03405 DOG1 1.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03405 K14431 - gmx:100775461 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03405 6 46265464 46272138 Mepo6g03405 6 46265464 46272138 ECH