Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03396 ATGGCGGAAGAACACAGACTGCAAGCACCACGATTATGCGTTAACAATTGCGGTTTCTTCGGCAACGCCGCAACGGAGAATCTCTGTTCAAGATGCTACCGTGATTTACAACTCAAAGAACAACAAGCTTCATCAGCCAAACTCGTTCTCAATCAATCCATCGCACCGTCTTCTCCGGCGGTGGTTGTTGCTGAACCGTCATCTTCGTTGCCGGATCCGGTTGGACCGGCGATCGTTGTGGTTGAAGAGAAACCGTTGCAACAGAATCGGTGTATGACGTGTAAGAAGCGCGTGGGGCTCACGGGGTTTAAGTGCAAGTGTGGGAGGATGTTATGTGGGACCCATCGTTACCCGGAGCAGCACGCGTGTGAGTTTGATTTTAAGGGGTTGGGGAAAGAGCAGATTGAGAAGGCGAATCCGGTGGTGAAAGGGGAAAAGTTGGAGAAGATCTGA 453 0.5099 MAEEHRLQAPRLCVNNCGFFGNAATENLCSRCYRDLQLKEQQASSAKLVLNQSIAPSSPAVVVAEPSSSLPDPVGPAIVVVEEKPLQQNRCMTCKKRVGLTGFKCKCGRMLCGTHRYPEQHACEFDFKGLGKEQIEKANPVVKGEKLEKI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03396 150 SUPERFAMILY AN1-like Zinc finger 81 145 IPR035896 -
Mepo6g03396 150 Pfam AN1-like Zinc finger 91 127 IPR000058 GO:0008270
Mepo6g03396 150 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 62 - -
Mepo6g03396 150 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Mepo6g03396 150 ProSiteProfiles Zinc finger AN1-type profile. 85 131 IPR000058 GO:0008270
Mepo6g03396 150 SMART AN1_Zf_4 91 128 IPR000058 GO:0008270
Mepo6g03396 150 FunFam Zinc finger AN1-type containing 6 75 146 - -
Mepo6g03396 150 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Mepo6g03396 150 Gene3D - 69 146 IPR035896 -
Mepo6g03396 150 Gene3D - 1 60 - -
Mepo6g03396 150 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 150 - -
Mepo6g03396 150 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03396 Mepo-Chr6 46175795 46176819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03396 1 150 C2H2 Transcription Factor Family AT3G52800 48.235 3.31e-45 144