Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03384 ATGAAGATTATCGCTGCTTACTTGTTGGCCGTTTTGGGAGGCAACCAATCCCCTTCTGCTGCTGATCTTAAACAAATTCTTGGATCAGTTGGAGTTGAGCCCGAGGATGGCAACATTGAGTTGCTCCTAAGTGAGGTCAAGGGCAAGGACTTTGCCGAGCTTATTGCTAGTGGAAGAGAAAAGTTGGCTTCAGTTCCATCCGGTGGTGGTGCTGTTGCTGTGTCTGCTGCAACTGGAGGAGGTGCTGCTGCTGCACCTGCTGAAGCAGCAAAGGAAGAGAAGAAGGTGGAAGAGAAGGAAGAATCCGATGATGTAAGTTTCAAAATTTATAGTAGTGTTGTTTGTTACTTGGTAATTTCATGA 363 0.4628 MKIIAAYLLAVLGGNQSPSAADLKQILGSVGVEPEDGNIELLLSEVKGKDFAELIASGREKLASVPSGGGAVAVSAATGGGAAAAPAEAAKEEKKVEEKEESDDVSFKIYSSVVCYLVIS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03384 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 108 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mepo6g03384 120 FunFam 60S acidic ribosomal protein P2 1 59 - -
Mepo6g03384 120 Hamap 50S ribosomal protein L12 [rpl12]. 2 108 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mepo6g03384 120 Pfam 60s Acidic ribosomal protein 17 104 - -
Mepo6g03384 120 Gene3D - 1 59 IPR038716 -
Mepo6g03384 120 CDD Ribosomal_P2 1 73 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03384 Mepo-Chr6 46038792 46040643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03384 1 70 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 77.143 2.81e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03384 K02943 - pvy:116129032 105.531