Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03379 ATGAACTTGGAGAATGAATCTACGAGTCATTATTTGTCTTCACCATCCAATAATAACCAAAATTCTCCATCAAAACCAAACTCACACAAGAAAAAAACAAAAACAGGAATAAAGAAATTCAAGGAGACGAGGCACCCAATTTACAAAGGAGTTCGCCAAAGATATAATGGAAACAAATGGGTTTGTGAAATTCTTGAACCAAACAAGAAGAAATCAAGAATATGGTTTGGAACTTACCCTACACCAGAAATGGCAGCTATAGCACATGATGTAGCTGTTCTAGCACTTCATGGCACTTCAGCAGTGTTCAATTTCCCTGATTCAGTTTCTCTTCTTCCAGTTTCGAAATCAACTTCACTTGAAGATATAAGAGAAGCTGCAAAGGCATTTACAAACACTACAATCTCTTCTTCTTTTGTTAACAATTTGAGTGTTGTGACTAAGCCTTGCTTGGTGGAATGTAAGAGCCAAGAAATTAGGGTTTTAGGAGGTGATAATATTGAGATTATGAATAATGATGATGAGTCTAAAGCAATGTTTTTTGATGAGGAGGTTTTGTTTAATATGCCAGGTTTTTTGAATAGCATGGCTGAGGGTTTGCTTATTACACCACCCTCCATGAAGAGTGCATTGGATTGGGATGATGTTGATTGTGAAATCGATTTAACACTATGGACAGAATAA 684 0.3626 MNLENESTSHYLSSPSNNNQNSPSKPNSHKKKTKTGIKKFKETRHPIYKGVRQRYNGNKWVCEILEPNKKKSRIWFGTYPTPEMAAIAHDVAVLALHGTSAVFNFPDSVSLLPVSKSTSLEDIREAAKAFTNTTISSSFVNNLSVVTKPCLVECKSQEIRVLGGDNIEIMNNDDESKAMFFDEEVLFNMPGFLNSMAEGLLITPPSMKSALDWDDVDCEIDLTLWTE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03379 227 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 12 226 IPR045277 GO:0003700
Mepo6g03379 227 MobiDBLite consensus disorder prediction 1 37 - -
Mepo6g03379 227 ProSiteProfiles AP2/ERF domain profile. 47 106 IPR001471 GO:0003700|GO:0006355
Mepo6g03379 227 MobiDBLite consensus disorder prediction 1 26 - -
Mepo6g03379 227 Pfam AP2 domain 46 98 IPR001471 GO:0003700|GO:0006355
Mepo6g03379 227 Gene3D AP2/ERF domain 47 107 IPR036955 GO:0003700|GO:0006355
Mepo6g03379 227 SUPERFAMILY DNA-binding domain 47 108 IPR016177 GO:0003677
Mepo6g03379 227 SMART rav1_2 47 112 IPR001471 GO:0003700|GO:0006355
Mepo6g03379 227 CDD AP2 46 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03379 Mepo-Chr6 45980767 45981450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03379 7 226 AP2-EREBP Transcription Factor Family AT5G51990 42.411 9.47e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g03379 AP2 3.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03379 - - gmx:100816109 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03379 6 45980767 45981450 Mepo6g03379 6 45980767 45981450 ECH