Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03375 ATGAGATTGGAGAAATGTTGGTTTTGTTCTTCAACTGTGTATCCTGGACATGGAATCCAATTTGTTCGTAATGATGCAAAGATATTTCGGTTTTGTAGATCAAAATGCCACAAGAACTTCAAAATGAAGAGGAATCCTCGTAAAGTAAAATGGACCAAGGCATATAGGCGAGTGCATGGAAAGGATATGACTCAGGATTCCACCTTTGAGTGTGAGAGAAAGCGAAACAGGCCTGAGAGATATGACAGGATTCTTACTGAGAATGTACTCAAGGCGATTCCTATGATTGTTAAAATCAGAGACACAAGGGAGGGGAGACTCCATAAGAAGAGGATGGAAGGAAACAAGAAGAAAGTGCAGAGGAAGGCAAAGAAGGAGTTGGAGCAGAGCATCCATATGGTCAAAGCTCCTTCCGCAGTACAACCCGAGAAGATCCAAGTCAAGGTTTCGCAACAGCAACAAGAGAATCCTCTCATGGAAGTGTAA 486 0.4239 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFECERKRNRPERYDRILTENVLKAIPMIVKIRDTREGRLHKKRMEGNKKKVQRKAKKELEQSIHMVKAPSAVQPEKIQVKVSQQQQENPLMEV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03375 161 Coils Coil 109 129 - -
Mepo6g03375 161 PANTHER 60S RIBOSOMAL PROTEIN L24 1 156 IPR000988 -
Mepo6g03375 161 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Mepo6g03375 161 SMART 4TRASH 6 44 IPR011017 -
Mepo6g03375 161 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Mepo6g03375 161 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Mepo6g03375 161 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Mepo6g03375 161 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Mepo6g03375 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03375 Mepo-Chr6 45948121 45950589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03375 1 160 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 68.323 2.40e-76 223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03375 6 45948121 45950589 Mepo6g03375 6 45948121 45950589 ECH