Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03350 ATGGCGGAGGATCGCAAAGATGCGAGTGATTACAGTTCAGAAGACGAAGGAACTGAGGATTACAAACGAGGTGGATACCATGCGGTTCAGATTGGTGACACTTTCAAAAATGGGGTCTATGTGGTTCAGAGTAAGCTTGGTTGGGGTCATTTTTCCACTGTTTGGCTCGCTTGGGATACTCAGAAATTGCGATATGTTGCCTTAAAAATTCAAAAGAGTGCTCAGCACTACACGGAAGCGGCAATGGATGAAATAAAGATTCTCAAACAAATTGCTGAAGGGGATCTAGAGGATAAGAAATGTGTTGTGAAGCTTTTGGACCACTTTAAGCATTCAGGGCCTAATGGTCAGCATGTTTGTATGGTTTTTGAATTCCTTGGGGACAATCTTCTTACACTTATCAAGTATAGTGATTATCGTGGTATTCCCCTTCCCATGGTCAAAGAAATTTGCTACCATGTTTTGGTGGGTTTGGATTATTTGCATCGTGAGCTTTCTATAATACACACTGATTTGAAGCCAGAAAATGTTTTGCTTGTCTCTCCAATTGATCCATCTAAAGATCCTAGAAAATCAGGAGTCCCTCTTATACTTCCAACCACTAAAGTCAAGACTGTGTCCAAGAACGGGACCACAAAACCTGACAAAAGTTCGAATGGAGATTTAACCAAGAACCAGAAAAAGAAAATGCGGAAAAAGGCTAAAAAAGCAGCTCAGAAGGAAAGTCCCGAGGTAGCAGAGGAGGATTCTGAAGCACCTGAACAAGATGATTGTAGTAATGATGTGAAACCAAATGTAGAAAATGGTGAAGGTAAACCTAATAGTCCCACAAGTAAAGATGAATCAGCAAAGACTTCTGAAACTAAGGATGTTCCACAAGGAAGTCAGGTTTCTAGGAGAGGCAGTTGCTCTACCAGAAAGAAGTTGCTCGCAGCTGTTGATCTTAAGTGCAAGCTTGTGGATTTTGGTAATGCTTGTTGGACGTATAAACAATTTACAAATGATATCCAGACAAGGCAGTATAGATGTCCCGAGGTTCTTCTAGGTTCTAAATACTCGACTCCGGCAGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGATAACTATTGCAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGGTTGATGCCTCGCAAGATTGCTCTTGGCGGCCGCTATTCCCGGGACTTTTTCAATAGATCTGGTGATTTGAGACACATTCGCCGGTTGCGGTTCTGGCCTATTACTAAGGTTTTGACGGAGAAGTATGATTTCAGTGCGCAAGATGCAAGTGACATGTCTGACTTTCTTGTTCCGTTACTTGACTTTGTTCCTGAAAAGAGACCAACGGCCGCTCAGTGTCTTACTCATCCATGGATGAGTGCAGGTCCTCGGACTCTTGAGCCCTCGGTGAATAGCATCCATACTGATGCTATTAACGGAGAAAAGCCTGGAAAATTAAGGGAAAAGGACGAGCAGGAGGCTGTGGAAGTTAGCATGGGGAATATGACCATTGATGGAACTCCAAAGACACTCAAAGATTTCCAATCTACAAAACAATCGGAGTAG 1620 0.4296 MAEDRKDASDYSSEDEGTEDYKRGGYHAVQIGDTFKNGVYVVQSKLGWGHFSTVWLAWDTQKLRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGIPLPMVKEICYHVLVGLDYLHRELSIIHTDLKPENVLLVSPIDPSKDPRKSGVPLILPTTKVKTVSKNGTTKPDKSSNGDLTKNQKKKMRKKAKKAAQKESPEVAEEDSEAPEQDDCSNDVKPNVENGEGKPNSPTSKDESAKTSETKDVPQGSQVSRRGSCSTRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYCRDEDHLALMMELLGLMPRKIALGGRYSRDFFNRSGDLRHIRRLRFWPITKVLTEKYDFSAQDASDMSDFLVPLLDFVPEKRPTAAQCLTHPWMSAGPRTLEPSVNSIHTDAINGEKPGKLREKDEQEAVEVSMGNMTIDGTPKTLKDFQSTKQSE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03350 539 MobiDBLite consensus disorder prediction 520 539 - -
Mepo6g03350 539 SUPERFAMILY Protein kinase-like (PK-like) 36 485 IPR011009 -
Mepo6g03350 539 MobiDBLite consensus disorder prediction 202 219 - -
Mepo6g03350 539 MobiDBLite consensus disorder prediction 521 539 - -
Mepo6g03350 539 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 7 500 - -
Mepo6g03350 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Mepo6g03350 539 MobiDBLite consensus disorder prediction 180 300 - -
Mepo6g03350 539 FunFam Serine/threonine-protein kinase SRPK-like protein 307 477 - -
Mepo6g03350 539 CDD STKc_SRPK 29 477 - -
Mepo6g03350 539 ProSiteProfiles Protein kinase domain profile. 40 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03350 539 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Mepo6g03350 539 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Mepo6g03350 539 SMART serkin_6 40 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03350 539 Pfam Protein kinase domain 314 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03350 539 Pfam Protein kinase domain 40 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03350 539 FunFam CMGC/SRPK protein kinase 26 125 - -
Mepo6g03350 539 Gene3D Transferase(Phosphotransferase) domain 1 123 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03350 Mepo-Chr6 45501640 45506694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03350 7 527 EF-hand Containing Proteins AT5G22840 69.772 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Mepo6g03350 Pkinase 8.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03350 K08832 - gmx:100791829 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03350 6 45501640 45506694 Mepo6g03350 6 45501640 45506694 ECH
Mepo6g03350 6 45501640 45506694 Mepo2g01771 2 26019206 26023725 PCT