Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03340 ATGGAGGGAGGTTCTGGTAAGAGGTTTCCTGTCAAGCTGAAGGATCTTCTGGCTACTGGGATTCTAGAGGGATTGAAAGTGAGATATGTCAAGGGACACAAGGCGCATAAACGGGGAGAAAAGGAGTTACAAGGTGTGATTAAAGACTCCGGAATTTTGTGCTTTTGTGGGAGTTGCAAGGGGAATCAGGCAAGTAAATGGAGGGATGGTTATTGTTTTTTTGTTGTCTCGCCGAATGTTTTTGAGTTGCATGCTGGTGGTGCTAATAAACGTCCTCCGGAGTATACTTACCTTGAGAATGGAAAACTCCTTCGGGATGTCATGAATGCCTGTTCAAGTCTTCCGTTGGACACATTGGATAAAGTGGTCCAAATGGTCCTGGGTGATTTCACTATGCAGAATTCTAATATCTGTTTCAATTGCAGAGGAATCCTAAATGCAATGCAAAGTCTTGAATCCAACAAGGGTGAGTCAAAACTAGTATGCAATCCTGCATGCATTGAGTTGAAAGAGACTCAAACTAGCCAACTTCAAACAGCAGCAACATGTAGTAAAAGTATTACCCCAGTAGTTCAACCCAGGTATGTTTTTTTTATATCACTAGAAACGGTAGTACGTCCAGAGTCATTAAATACTGAGACGGTGTTTCCGAAGTCATCATACACTGAGATGGTGGTTCCAAACTCATCAAACACAAATATGGTTCGAGAGACATCAGACACAAATATGATTCCAAAGGCATTGAGTAATGGCATGAAGCAGAGTGCATCTGGCAAGAGTCGGGGAAAAATAACTAAAAAGGATCTACGGTTGCATAAGTTGGTATTTGCAGAAGACGTGTTACCAGATGGAACTGAAGTTGCTTACTATTCTCACGGAAAGAGACTATTGGTCGGTTCCAAAAAGGGATATGGAATTTTTTGTACCTGTTGCAGTGCAGTGGTTAGTGCTTCTATGTTTGAAGCTCACGCTGGATGGTCATCTCGACGCAAGCCTTATCAGCACATATATACATCTAATGGAGTCTCACTACATGAGCTGTCCCTCTCTCTATCAAAAGATCAGAGATTTTCTGCCAGTGATAATGATGACCTTTGCAGCATATGTCAAGATGGAGGGGATCTTTTGTGCTGTGATGGATGCCCAAGGGCTTTTCACATAGTTAGTCCAATTAGTCCAGCACAGACACTCGGTTCTTCAGTGCATGGAACAATTGACGGGAAATTTGATGACGGATATATAGTCACGGTGGACCTGGGTTCTGAACAGCTGAAAGGTGTCCTGTATCATGTTTCAAGTAATGCATCTAAGGGTTCTTCGATTGGAGAGATTCCTTTTTCTTTTTGTAACTTAGGCTTTGTTTGGGAGTTGGGTTTTGAATTGAAGGGGAGGGGAGGGGAGGGGAAGGCAAGAGAGTTTCCCCATGAGAAAACTGATAGATTAGAAGAGTAG 1452 0.4263 MEGGSGKRFPVKLKDLLATGILEGLKVRYVKGHKAHKRGEKELQGVIKDSGILCFCGSCKGNQASKWRDGYCFFVVSPNVFELHAGGANKRPPEYTYLENGKLLRDVMNACSSLPLDTLDKVVQMVLGDFTMQNSNICFNCRGILNAMQSLESNKGESKLVCNPACIELKETQTSQLQTAATCSKSITPVVQPRYVFFISLETVVRPESLNTETVFPKSSYTEMVVPNSSNTNMVRETSDTNMIPKALSNGMKQSASGKSRGKITKKDLRLHKLVFAEDVLPDGTEVAYYSHGKRLLVGSKKGYGIFCTCCSAVVSASMFEAHAGWSSRRKPYQHIYTSNGVSLHELSLSLSKDQRFSASDNDDLCSICQDGGDLLCCDGCPRAFHIVSPISPAQTLGSSVHGTIDGKFDDGYIVTVDLGSEQLKGVLYHVSSNASKGSSIGEIPFSFCNLGFVWELGFELKGRGGEGKAREFPHEKTDRLEE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03340 483 Pfam Tify domain binding domain 45 111 IPR032308 -
Mepo6g03340 483 Pfam Tify domain binding domain 301 347 IPR032308 -
Mepo6g03340 483 PANTHER AUTOIMMUNE REGULATOR 8 387 - -
Mepo6g03340 483 SUPERFAMILY FYVE/PHD zinc finger 359 387 IPR011011 -
Mepo6g03340 483 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 358 398 IPR013083 -
Mepo6g03340 483 MobiDBLite consensus disorder prediction 464 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03340 Mepo-Chr6 45322838 45339083 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03340 10 387 PHD Transcription Factor Family AT2G36720 37.343 3.71e-68 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03340 - - tpra:123896735 535.413