Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03332 ATGGACTCACTAGAGAACACCAATAACTTTGAGCTGCATGACTTCATTGACGATCCAAACTTTGATCAATTTATCGATTTAATTCGAGGTGAGCATGAAGATGCAATATCTAACTTTGGTTCTGACCTTATCAATGATTGCTTCATTGATAATAATATTAACCAACTTCTTTCAATTCCTCCAAACCCATTATATGATCACAACAACAATATTATTAATAATAATGTTGTCAATGAGTATAATCCAAGCTCTACAACAATTGGCTCCTTCTCTTGTTATGATGGAGAGGTTAAAGGAGAAGGAGAAAATGATGGAGGTGGTTCTTCTGCAACAACAACGACGACCACCACCACGATCGATGATGCCAACCCTAGGGCTAAAACTGATAGGTCCAAGACTCTCATTTCTGAGAGGAGGAGGAGAGGCAGGATGAAGGATAAGCTTTATGCATTGCGTTCTTTGGTTCCCAACATTACAAAGATGGATAAGGCCTCTATAATTGGAGATGCAGTATCATATGTGCATGACCTTCAAGCACAAGCTAGGAAGTTGAATGCTGAGGTTTCAGGACTTGAAGCATCCTTATCAGTGTCTGAAAATTATCAAGGATCAATTAGCAACACCATTAATGTTCAAAGCCATCCAATTTGCAAGAAAATTATCCAGGTGGACATGTTTCAAGTGGAGGAAAGAGGTTATTATGCAAAAATTTTGTGCAGTAAAGGAGAAGGAGTAGCTGCTTCATTGTACAAGGCTCTTGAGTCTCTTGCAAATTTCAATGTTCAAAATTCAAACTTAGCTACAGTTTGTGACACTTTTCTACTTACGTTTACATTGAATGTAAACGGTTCTGAACCAGAAATGAACCTTCAAAATTTGAAGCTATGGGTGGCTGGTGCTCTTTTGAACCAAGGCTTTGAATTCATGCCATCATTTTGA 939 0.3813 MDSLENTNNFELHDFIDDPNFDQFIDLIRGEHEDAISNFGSDLINDCFIDNNINQLLSIPPNPLYDHNNNIINNNVVNEYNPSSTTIGSFSCYDGEVKGEGENDGGGSSATTTTTTTTIDDANPRAKTDRSKTLISERRRRGRMKDKLYALRSLVPNITKMDKASIIGDAVSYVHDLQAQARKLNAEVSGLEASLSVSENYQGSISNTINVQSHPICKKIIQVDMFQVEERGYYAKILCSKGEGVAASLYKALESLANFNVQNSNLATVCDTFLLTFTLNVNGSEPEMNLQNLKLWVAGALLNQGFEFMPSF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03332 312 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 10 304 - -
Mepo6g03332 312 MobiDBLite consensus disorder prediction 99 130 - -
Mepo6g03332 312 Pfam Helix-loop-helix DNA-binding domain 135 178 IPR011598 GO:0046983
Mepo6g03332 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 201 IPR036638 GO:0046983
Mepo6g03332 312 Coils Coil 174 194 - -
Mepo6g03332 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Mepo6g03332 312 Gene3D - 120 194 IPR036638 GO:0046983
Mepo6g03332 312 SMART finulus 134 183 IPR011598 GO:0046983
Mepo6g03332 312 MobiDBLite consensus disorder prediction 105 122 - -
Mepo6g03332 312 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 124 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03332 Mepo-Chr6 45262529 45264186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03332 1 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 51.385 9.09e-100 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g03332 HLH 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03332 K26214 - gmx:100805451 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03332 6 45262529 45264186 Mepo6g03332 6 45262529 45264186 ECH
Mepo6g03332 6 45262529 45264186 Mepo2g01797 2 26427817 26429226 PCT