Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03328 ATGGCGGAGATTCACATACCTAGCAAAGATGTCAAGAGTGAAAGTAGCAGCGGTACCGGAGCGTTGCCTATTCGAAGAAAACGTTCGTTCTTCGATTTAAACGAAGAAGCCGTGGATGATGGAGATGATCATGTGATACTGATAAGTGAAGGCCTTTGTGGTGAAATAAGTAACAATGAGATATCATCACAAGAAGGGAATTTGAGTAGCAATAATAATTCCAGTGAAGAAGGAAAAGGGCGTGGAAGTACGGTTAGACAATATGTTAGGTCGAAAATGCCTAGGCTTCGTTGGACTCCTGATCTTCATTTATCTTTTGTGCATGCTGTTGAGAGGCTTGGAGGGCAAGAAAGAGCAACACCTAAGTTGGTTCTCCAGTTGATGAATGTGAGAGGACTTAGCATTGCACATGTCAAGAGTCATTTGCAGATGTACCGGAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTGTCCCAAAAAAATAGAGCAATGCAAGGAAGGCATCACATTTTAGATATGTATGGAAGATTCAATGTACAAGGACACTTTGGTGTTGAAAACAACTATTTGCAGCCATCGTCTCCTCTACTAAAACAACCATCATATAATGAAATCAAAGCTCATGACACTTCAAGATTTCATCAGAGTGGGCTTTTCAATAATAATCACGTGATCTTCAGATCAAGTTCAGTGTGGGACAAAGATTTTTCACATCTATTTGATGTAAAGGATGCAATTACAAGAAATAATATTGCACCTATTAGGTCTAGCCAAGTAAGTCAATTACTACCCGAATCAAAAAGCTTATCTCGAGGGGATGATAATGGTGCAAAACATTTTCCATGGAGCACCTATTCTAGTTCTATCAATTATCAACGTAGCTCTGAGTACACAATGTTTGGTCCTGAGGTACACGATAAAAAAGATCCAATGCAAGAATCCATGCATCATACTCAAGTATCAAAGCAAAGTCATGTCACAACCAAGTTTAAAAAGTTGAATGAGAAGAAAGAGTCATCAAATTTCCTAAAGCTAAAGCTAAGTCGAGATTCAGAAAGTGTTAAGGATCAAGAAACCAATACGATACTTTCTCTTTCATTGTTCTCATCATCCTCCAATTCAAAGTGA 1128 0.3856 MAEIHIPSKDVKSESSSGTGALPIRRKRSFFDLNEEAVDDGDDHVILISEGLCGEISNNEISSQEGNLSSNNNSSEEGKGRGSTVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQKNRAMQGRHHILDMYGRFNVQGHFGVENNYLQPSSPLLKQPSYNEIKAHDTSRFHQSGLFNNNHVIFRSSSVWDKDFSHLFDVKDAITRNNIAPIRSSQVSQLLPESKSLSRGDDNGAKHFPWSTYSSSINYQRSSEYTMFGPEVHDKKDPMQESMHHTQVSKQSHVTTKFKKLNEKKESSNFLKLKLSRDSESVKDQETNTILSLSLFSSSSNSK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03328 375 MobiDBLite consensus disorder prediction 1 20 - -
Mepo6g03328 375 FunFam Myb family transcription factor 92 150 - -
Mepo6g03328 375 SUPERFAMILY Homeodomain-like 92 148 IPR009057 -
Mepo6g03328 375 MobiDBLite consensus disorder prediction 61 81 - -
Mepo6g03328 375 Pfam Myb-like DNA-binding domain 96 146 IPR001005 -
Mepo6g03328 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 150 IPR017930 -
Mepo6g03328 375 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 71 303 IPR046955 GO:0003700
Mepo6g03328 375 MobiDBLite consensus disorder prediction 302 327 - -
Mepo6g03328 375 MobiDBLite consensus disorder prediction 61 85 - -
Mepo6g03328 375 Gene3D - 93 150 - -
Mepo6g03328 375 NCBIfam myb-like DNA-binding domain, SHAQKYF class 94 149 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03328 Mepo-Chr6 45190548 45194809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03328 85 153 G2-like Transcription Factor Family AT2G42660 82.609 3.49e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo6g03328 Myb_DNA-binding 9.4e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03328 6 45190548 45194809 Mepo6g03328 6 45190548 45194809 ECH