Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03326 ATGGCAGGACCCGTTTCACAAGATTGGGAACCCGTCGTCCTCCGCAAAAAAGCTCCCACCGCCGCTGCCAGAAAGGATGACAAAGCTGTCAACGCCGCTCGCCGTGCCGGAGCCGATATCGAAACCATGAAGAAACATAATGCTGCGACAAACAAAGCTGCCTCTAGCAGCACTTCATTGAACACTAAGAGGCTTGATGAGGATACAGAGAATTTAGCTCATGATCGAGTCCCAACTGAACTCAAGAAAGCTATAATGCAAGCCAGGATGGACAAGAAGCTTACTCAGGCACAACTTGCTCAAATTATCAATGAGAAGCCTCAAGTGATCCAGGAGTATGAGTCTGGGAAAGCCATTCCAAATCAGCAGATAATTGGCAAGTTGGAGAGAGCTCTTGGTGCCAAACTGCGTGGGAAGAAATGA 423 0.4846 MAGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETMKKHNAATNKAASSSTSLNTKRLDEDTENLAHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03326 140 ProSiteProfiles Cro/C1-type HTH domain profile. 85 139 IPR001387 -
Mepo6g03326 140 Pfam Multiprotein bridging factor 1 7 77 IPR013729 -
Mepo6g03326 140 CDD HTH_XRE 83 133 IPR001387 -
Mepo6g03326 140 Gene3D - 69 140 IPR010982 GO:0003677
Mepo6g03326 140 FunFam Multiprotein bridging factor 1 69 140 - -
Mepo6g03326 140 Pfam Helix-turn-helix 85 135 IPR001387 -
Mepo6g03326 140 MobiDBLite consensus disorder prediction 44 75 - -
Mepo6g03326 140 SUPERFAMILY lambda repressor-like DNA-binding domains 78 136 IPR010982 GO:0003677
Mepo6g03326 140 SMART mbf_short4 84 139 IPR001387 -
Mepo6g03326 140 MobiDBLite consensus disorder prediction 48 62 - -
Mepo6g03326 140 MobiDBLite consensus disorder prediction 1 30 - -
Mepo6g03326 140 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03326 Mepo-Chr6 45157973 45162257 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Mepo6g03326 MBF1 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03326 K03627 - gmx:100500420 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03326 6 45157973 45162257 Mepo6g03326 6 45157973 45162257 ECH