Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03310 ATGGCCACCATGCCGTTGGGGCCACACCACCATCATCAACCACCGCAACAAGCACCACTTCCGTTACCGTTACCACCGTCGTTACAGTTGCAACAACCGCAAACTGTGAATGAGCCGGTGAAAACTACGGCGGCTAACGGCGGCTCCGGTATGGACACTGATAAGGAAATGTCAGCTAGTGTCGTTGACAGTAATGATGCAGTCACTGGTCACATAATCTCAACTACCATTGGAGGCAAAAACGGTGAACCTAAACGGACAATCAGTTACATGGCCGAACGTGTTGTTGGCACGGGATCATTCGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGTGAGGCGGTGGCTATAAAGAAGGTTTTGCAAGACAAGCGGTACAAAAATCGTGAACTGCAGTTAATGCGCGTGATGGATCACCCAAATGTAATTTCCTTGAAGCACTGTTTTTTCTCTACAACAAGCAGAGACGAACTTTTTCTGAACTTGGTCATGGAGTATGTCCCTGAGACGATGTACCGAGTTCTAAAACACTACAATAATATCAACCAGAGAATGCCCTTGATCTATGTGAAATTATATACATACCAAATCTTCAGGGGACTAGCATATATCCATACTGTGCCAGGAGTTTGTCATAGGGACGTGAAGCCCCAAAATCTTTTGGTTGATCCTCTCACTCACCAAGTTAAGCTTTGCGATTTTGGGAGTGCGAAAGTTCTGGTCAAGGGTGAAGCGAACATTTCATACATATGTTCACGGTACTATCGGGCCCCAGAACTAATATTTGGTGCGACAGAATACACTACTTCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCAGAACTTCTTCTAGGCCAGCCATTGTTCCCAGGAGAGAATCAGGTGGACCAACTTGTGGAAATTATTAAGGTTCTGGGTACTCCAACTCGAGAAGAAATTCGTTGTATGAACCCTAATTATACCGATTTTAGATTCCCTCAGATTAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCCCCTGAAGCTATTGACCTTGCATCGAGGCTTCTTCAATATTCACCAAGTCTTCGTTGCAGTGCTCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGAGAGCCCAATGCCCGGCTTCCTAATGGTCGTCCTCTGCCTCCACTTTTCAACTTTAAACAGGAATTATCTGGAACATCCCCTGAACTGATCAACAAACTCATCCCAGAGCATGTCAGGCGGCAGACTGGTCTTGGCTTCCCATATCCCGGCTAG 1287 0.46 MATMPLGPHHHHQPPQQAPLPLPLPPSLQLQQPQTVNEPVKTTAANGGSGMDTDKEMSASVVDSNDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDKRYKNRELQLMRVMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYNNINQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCSALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGTSPELINKLIPEHVRRQTGLGFPYPG 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03310 428 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 54 419 - -
Mepo6g03310 428 SMART serkin_6 90 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03310 428 Pfam Protein kinase domain 90 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03310 428 FunFam Glycogen synthase kinase-3 beta 74 169 - -
Mepo6g03310 428 MobiDBLite consensus disorder prediction 29 49 - -
Mepo6g03310 428 Gene3D Phosphorylase Kinase; domain 1 75 169 - -
Mepo6g03310 428 MobiDBLite consensus disorder prediction 12 28 - -
Mepo6g03310 428 ProSiteProfiles Protein kinase domain profile. 90 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03310 428 MobiDBLite consensus disorder prediction 1 56 - -
Mepo6g03310 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Mepo6g03310 428 ProSitePatterns Protein kinases ATP-binding region signature. 96 120 IPR017441 GO:0005524
Mepo6g03310 428 Gene3D Transferase(Phosphotransferase) domain 1 170 417 - -
Mepo6g03310 428 FunFam Shaggy-related protein kinase kappa 170 417 - -
Mepo6g03310 428 CDD STKc_GSK3 85 377 IPR039192 -
Mepo6g03310 428 SUPERFAMILY Protein kinase-like (PK-like) 89 401 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03310 Mepo-Chr6 45020895 45026259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03310 94 412 MAP Kinase Gene Family AT3G59790 35.629 7.07e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mepo6g03310 Pkinase 2.3e-63 CL0016