Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03280 ATGCAACGAGCAAGTGACCTTCTTGTTGGGATCACAATGTCTGTGCCGATCAATAATCAAATCATTGATCGTGCACGTTCAGCTATGAACGAATTGTGCAAGATAGGACTTGCAGAAAACAATCCTGTATGGCTTCAACATAGGGAACATAGGTACGAAATTCTCGATAATATTGAATATTTGAAACAATTTAGTCAGGTTGATGCATCATTGATGGAGCTTGTTAAGATGGTTGAAGTTGGAGATCTTCAAACTTTACCTAGTTTTGATTCGTGTCGAATCCAAGATCCAATGTCAACAAAGGAAGTTTTTGGACAAGGTTTGCAGATTGAAGGTTCACGGGATATGGCATTGATTAAGATAAGTCCAACTAAACTAGTTGAATTACTTATGGATGTGAATCAATGGTGTACGGCATTTTGCAACATAGTCTCAAGAGCAACGATTCTACGATTCTTTTCAGATGGAGTAGAAGGAAGCTATAATGAGAAAATGCATGTGATGAGTGCAGAATTTCATTTGCCTAGTCCTTTTATACCAACTCGGGAGTGTGTTTTTGCAAGATATAGCAAACAACTCACTCATAACATATGGGCTGTTGTTGATGTATCTTTGGAGGACATTTTCCCTTTTCCTTCAAACAATTTTCATAAAAGACCTTCAGGCTGTTTGATTATAGGAATGCCCGATGGAAACTCCAAGGTTATATGGGTGGAGCATGTGGTAGCAGACCATAGTCAATTGAATGGTCTTTTTAAGACATTTGTTACCTCTGGTTTGGCTTTTGGTGCACCACGCTGGCTTGCTTCCATTGTCCGGCACATTGAGTGGTCTGAAACACTAATGGCAACAAAACTTATTGCAGATCCTCGGGTTCTTATACCACAAATTGGGATGACAAGTTTATTGAAATTGGCTGAAAGAATGAGGAGAAGATTTTATGCCAGTCTTAGTTCCACCACTAACAATCCATGGATGCGGCTAGCTCCTGTTCCTGCTGATTCAGAAGATATTAGAGTTATGATTGGGGATAATATGGCTGGTATTGCATCAGTGGTTTTTTGTACTACTATTTGGCTTAATGTCTCCCCAAATCGATTATTCAACTTCCTTCGGCACGAGAAATCCAGAAGCAAGTGGGATAAACTTTCACAAAACCTTGCTATTCAAGAATTCGCATGCATGCTCACTGGCAAACATCCAGAGAATCGTGTTTCTTTGCTTAGCGCAAGTACTTCTGAGGACAAGACTGAAATCTTTTACCTGCAAGAGAGTTATGCTGATACAATTGCTTCCTACGTGATTTATGCTCCGTTAGACGAGCCAGCATTGACATCTCTTGTAACTGGATCAAACCCAAACAATGTAGTTGCCTTTCCATCAGGGTTTGCTATTATCCCAGGAGGGTTACCAAGAGATGGTGATAAAGGAAAAGGCAATGCCGATAGTAATAATGCTAACGATGAAAGTCTTCTAACTATCTCATTTCAAATCATTGATAATGCCAGCAATGATGCATCTATCGCTCCGGAATCAGTTCAAACCATCTATAACATCATTACAGATACAGTTGCTGCTATAAAAGGGGCAATATCGTATCATAGTCAATTCAACAATTGGGATCAAGATGAAGTGGCAAATAGCTTGGCAGCATTAGTAGTGTAG 1665 0.3964 MQRASDLLVGITMSVPINNQIIDRARSAMNELCKIGLAENNPVWLQHREHRYEILDNIEYLKQFSQVDASLMELVKMVEVGDLQTLPSFDSCRIQDPMSTKEVFGQGLQIEGSRDMALIKISPTKLVELLMDVNQWCTAFCNIVSRATILRFFSDGVEGSYNEKMHVMSAEFHLPSPFIPTRECVFARYSKQLTHNIWAVVDVSLEDIFPFPSNNFHKRPSGCLIIGMPDGNSKVIWVEHVVADHSQLNGLFKTFVTSGLAFGAPRWLASIVRHIEWSETLMATKLIADPRVLIPQIGMTSLLKLAERMRRRFYASLSSTTNNPWMRLAPVPADSEDIRVMIGDNMAGIASVVFCTTIWLNVSPNRLFNFLRHEKSRSKWDKLSQNLAIQEFACMLTGKHPENRVSLLSASTSEDKTEIFYLQESYADTIASYVIYAPLDEPALTSLVTGSNPNNVVAFPSGFAIIPGGLPRDGDKGKGNADSNNANDESLLTISFQIIDNASNDASIAPESVQTIYNIITDTVAAIKGAISYHSQFNNWDQDEVANSLAALVV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03280 554 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 531 IPR042160 -
Mepo6g03280 554 Pfam START domain 102 273 IPR002913 GO:0008289
Mepo6g03280 554 SMART START_1 62 277 IPR002913 GO:0008289
Mepo6g03280 554 CDD START_ArGLABRA2_like 19 276 - -
Mepo6g03280 554 SUPERFAMILY Bet v1-like 299 467 - -
Mepo6g03280 554 ProSiteProfiles START domain profile. 40 280 IPR002913 GO:0008289
Mepo6g03280 554 SUPERFAMILY Bet v1-like 112 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03280 Mepo-Chr6 44763927 44767868 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03280 69 532 Homeobox Transcription Factor Family AT4G04890 40.166 1.55e-105 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03280 K09338 - jre:108992281 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03280 6 44763927 44767868 Mepo5g00062 5 630477 634962 ECH
Mepo6g03280 6 44763927 44767868 Mepo6g03280 6 44763927 44767868 ECH