Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03278 ATGCAACGAGCAAGTGACCTTCCTGGAGTCTCAATATTTGATGGGCTGATCAACAATAAAATCATTGATCGTGCTCGTTCAGCTATGAAAGAACTGTACAAAATAGGAATTGCAGAAAACAATGTATGGCATCAACATAAGGAACATAGGTATGAAATTCTCGATGATATTGAATATTTGAAACAATTTGGTAGGGTTGATGCATCATTGATGGAGATTGTTAGGTTGGTTAAAGTTGGAGAGCTTCAAACTTCACCTAGTTTTGATTTGTGTCGAAACCAAAATTCAATGTACACAATGGAAGTTTTTGAACAAGGTTTGCATATTGAAGCTTCTCGGGACATGGCATTGATTAAGATAAGTCCAACTAAACTAGTTGAATTACTTATGGATGTGAATCAATGGTCGATGGCATTTTACAACATTGTCTCACGAGCAAGGATTCTAAAAAGCTTTTCAGATGGTATAGAAGGAAGCTATGATGAAAAAATGCATGTGATGAGTGCAGAATTTCATTTCCCTAGTCCTGTTATACCAACTCGGAAGTGCTTTTTTGCAAGATATAGCAAGCAATTCTCTCATAACATATGGGCTGTTGTTGATGTATCTTTGGAGGACATTTTACAATCTCCTTCAAACAATTTTCATAAAAGACCTTCAGGCTGTTTGATTGAAGGAATGCCCGATGGAAACTCCAAGGTTATATGGGTGGAGCACGTGGAAGCAGACTATAGTCAATTGAGTGATCTTTTTAAGCCATTAGTTACCTCAGCTTTGGCTTTTGGTGCAACACGCTGGCTAACTTCCATTATCCGTCACATTGAGTGGTCTGAAACACTGAATGCTACAAAACTTATTGCAGATTCTGGAGTTCTTATACCTCAAATTGGGAGGACAAGTTTCTTGAAATTGGCCGATAGAATGATGAGAAGATTCTGTGCCAATCTTGGTTCCACCACTAAGAATCCATGGATTCGACTAGCTCCTCTTCCTGCTGGTTCAGCAGATATTAGAGTTATGATTGCAAATGATATGGCTGGTAGTGCAAATAACCCTAATGGAACATCACTGTTTTTTTGTACTACTCTTTGGCTTAATGTCTCCCCAAATCGATTATTCAACTTCCTTCGGCACGAGAAATCCAGAAGCAAGTGGGATAAATATTCACAAAACCTTTCTATTCGAGAATTTGCATGCATGCTAACTGGCAAACATCCAGAGAATCGTGTTTCTCTGCTTAGAGCAAGTGACAAGAATGAAATATTTTACCTACAAGAGAGTTACGCAGATACAACAGCTTCCTACGTGATTTATGCTCCTTTAGACGAGCAAGCATTGAGATCTCTTGCAACTGGATCAAACCCAGACGATGTAGTTACTTTTCCATTAGGGTTTGCTATTATCCCAGGAGGGTTACCAATAGATGGTGATAAAGGAAAAGGCAATGCCAATAGTAATGCTAATGATGAAAGTCTTCTAACTATCTCATTTCATATCATTGATAATGCCAACAATGTTGCATCTATTGCTCCGGAATCAGTTCAAACCATCTATAACATGGTTACAGAAACAATGGCTGCTATAAAAGATGCAGTGTCGTATCATAGTCTACTCAACAATTGGGATCAAGATGAAGTGGCAAATAGCTTGGTAGCATAG 1659 0.384 MQRASDLPGVSIFDGLINNKIIDRARSAMKELYKIGIAENNVWHQHKEHRYEILDDIEYLKQFGRVDASLMEIVRLVKVGELQTSPSFDLCRNQNSMYTMEVFEQGLHIEASRDMALIKISPTKLVELLMDVNQWSMAFYNIVSRARILKSFSDGIEGSYDEKMHVMSAEFHFPSPVIPTRKCFFARYSKQFSHNIWAVVDVSLEDILQSPSNNFHKRPSGCLIEGMPDGNSKVIWVEHVEADYSQLSDLFKPLVTSALAFGATRWLTSIIRHIEWSETLNATKLIADSGVLIPQIGRTSFLKLADRMMRRFCANLGSTTKNPWIRLAPLPAGSADIRVMIANDMAGSANNPNGTSLFFCTTLWLNVSPNRLFNFLRHEKSRSKWDKYSQNLSIREFACMLTGKHPENRVSLLRASDKNEIFYLQESYADTTASYVIYAPLDEQALRSLATGSNPDDVVTFPLGFAIIPGGLPIDGDKGKGNANSNANDESLLTISFHIIDNANNVASIAPESVQTIYNMVTETMAAIKDAVSYHSLLNNWDQDEVANSLVA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03278 552 Gene3D - 72 277 IPR023393 -
Mepo6g03278 552 SUPERFAMILY Bet v1-like 296 469 - -
Mepo6g03278 552 ProSiteProfiles START domain profile. 21 279 IPR002913 GO:0008289
Mepo6g03278 552 Pfam START domain 92 268 IPR002913 GO:0008289
Mepo6g03278 552 CDD START_ArGLABRA2_like 21 275 - -
Mepo6g03278 552 SUPERFAMILY Bet v1-like 85 275 - -
Mepo6g03278 552 SMART START_1 64 277 IPR002913 GO:0008289
Mepo6g03278 552 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 532 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03278 Mepo-Chr6 44750638 44757460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03278 21 533 Homeobox Transcription Factor Family AT4G04890 38.068 1.23e-109 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03278 K09338 - jre:108992281 460.685