Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03251 ATGGTTGACACAAAGGTTCATATCAACATTGTATTTATTGGTCATGTCAACTCTGGGAAGTCAACTACTGCTGGTCATTTGATTTACAAGCTTGGAGGTGTTGAAAAGAGTGCCATTGAGGCACTTGGGAAAGAAGCTGCTGAGATGAAGAAACGTTCCTTCAAGTATGCTTGGGTGCTTGACAAGCTCAATGCTGAGCGTGAAAGAGGTATCATAATTGACATTTCTATGTGCAAGTTTGAGACAACCAAGTACTGCTTCACTCTCATTGATGCCCCCGGACACAGGGATTTCATTAAGAACATGATCACCGGGACCTCCCAAGCTGACTGTGCTGTTCTCGTCATTAATTCCACTGCTATTGGTTTGCGAACTGGTTGGTCTAAGAATGGTCAGACCTGGGAACATGCTCTTCTTGCCTTCACTCTTGGTGTGAGGCAAATGATCTGCTGCTGCAACAAGATGGATGCCATTACACCCAAATACTCCAAGGATAGGTATGAAATAATTGTGAAGGGAATTTCACCCGCTTTGATGAGGATTGGTTATAACATAGATAAAATTCCATTTGTTCCCATCTCTGGCTATAAGGGAGATAACATCATTGAGCGCTCTACTAACCTTGATTGGTACGAAGGTCCTACCCTTCTTGAAGCTCTTGACCAAATCGACGAGCCTAAGAGGCCTTTAGGCAAGCCTCTGCGACTACCACTTCAACATGTCTACAAGATTGGAGGTGTTGGAATTGTACCTGTCGGACGTGTTGAGACTGGTGTGTTGAAACCTGGAATGGTGCTGACTTTTGCCCCAACTGGGCTACAATCTGGAGTTAAGTCTGTGCAGATGCATCATGAAAACATCAGTGAGGCCCTTCCTGGTGATATTGTGGGATTTCACCTTACAAATAAGAAATTGTCCGATAAGAATCTTATGCGAGGCTATGTTGCGTCAGACTCCAAGGATGAACCGGTCATGGAGGCTGCTAAGTTTACATCTCGTGTTATCGTCATTAACCACCCTTCAAAGATTACTCAAGGATATACTCCTGTCCTTGACTGCCACACCTCCCACACTGCTGTCAAGTTTGCTAAGCTTGTTACGAAGTTCGATAGGGAATCAGGTGTGGAATTGGAGAAGAAGCCCATGTCTTTGAAGAATGGTGATGCCGCTGTCGTTAAGATGATTCCTATGAAACCCATGGTCGTGGAGGGTATCAATGAATATCCATCCCTTGGCCGTTTTGCTGTCAGAGACATGCGTCAAACTGTGGCTGTGGGAGTCGTCATGGCTGTGAAGAAGAAGGGTCATAAGAACAAGGCAGCAAAAAGGATGATCAGTTCCACAACTGATCAGAAAGATGATGTAGCAATGAATGAGGCCGATTCTTCTCTCAACTTAACATCCAAGAAGAGAAAATTTGAAATACTTCCTTTATCTGGATCAGGTCTCGTTATTGGTGATGACGGTCGTCTTCATCACAAAAACATAATCTGTTCCGTTATGTCAACCAAAGATAAGGGAGAGACTTCTGGAAATACCCCAGTGAATCCCCTCATAGCAGTCGACCCCGTTGATATTATTGCAGCTAGGCTACATTCAACCGTACTCCACCAGCCTGAAGATAGGAATATCAATCCCACAACAACAACAACAAGTGCAGCAAATGATCAGGACATGTAG 1680 0.4429 MVDTKVHINIVFIGHVNSGKSTTAGHLIYKLGGVEKSAIEALGKEAAEMKKRSFKYAWVLDKLNAERERGIIIDISMCKFETTKYCFTLIDAPGHRDFIKNMITGTSQADCAVLVINSTAIGLRTGWSKNGQTWEHALLAFTLGVRQMICCCNKMDAITPKYSKDRYEIIVKGISPALMRIGYNIDKIPFVPISGYKGDNIIERSTNLDWYEGPTLLEALDQIDEPKRPLGKPLRLPLQHVYKIGGVGIVPVGRVETGVLKPGMVLTFAPTGLQSGVKSVQMHHENISEALPGDIVGFHLTNKKLSDKNLMRGYVASDSKDEPVMEAAKFTSRVIVINHPSKITQGYTPVLDCHTSHTAVKFAKLVTKFDRESGVELEKKPMSLKNGDAAVVKMIPMKPMVVEGINEYPSLGRFAVRDMRQTVAVGVVMAVKKKGHKNKAAKRMISSTTDQKDDVAMNEADSSLNLTSKKRKFEILPLSGSGLVIGDDGRLHHKNIICSVMSTKDKGETSGNTPVNPLIAVDPVDIIAARLHSTVLHQPEDRNINPTTTTTSAANDQDM 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03251 559 FunFam Elongation factor 1-alpha 1 226 - -
Mepo6g03251 559 FunFam Elongation factor 1-alpha 229 318 - -
Mepo6g03251 559 SUPERFAMILY Translation proteins 226 321 IPR009000 -
Mepo6g03251 559 MobiDBLite consensus disorder prediction 537 559 - -
Mepo6g03251 559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 248 IPR027417 -
Mepo6g03251 559 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 230 IPR000795 GO:0003924|GO:0005525
Mepo6g03251 559 CDD EF1_alpha_III 325 428 - -
Mepo6g03251 559 Pfam Elongation factor Tu GTP binding domain 6 222 IPR000795 GO:0003924|GO:0005525
Mepo6g03251 559 CDD EF1_alpha_II 232 321 - -
Mepo6g03251 559 Pfam Elongation factor Tu C-terminal domain 324 431 IPR004160 -
Mepo6g03251 559 Gene3D - 1 226 IPR027417 -
Mepo6g03251 559 NCBIfam translation elongation factor EF-1 subunit alpha 1 434 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mepo6g03251 559 Gene3D Translation factors 229 318 - -
Mepo6g03251 559 FunFam Elongation factor 1-alpha 325 432 - -
Mepo6g03251 559 MobiDBLite consensus disorder prediction 538 559 - -
Mepo6g03251 559 CDD EF1_alpha 9 227 - -
Mepo6g03251 559 PANTHER TRANSLATION FACTOR 5 434 - -
Mepo6g03251 559 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 328 431 IPR009001 -
Mepo6g03251 559 Pfam Elongation factor Tu domain 2 250 315 IPR004161 GO:0005525
Mepo6g03251 559 Gene3D Translation factors 325 432 - -
Mepo6g03251 559 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mepo6g03251 559 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mepo6g03251 559 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Mepo6g03251 559 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mepo6g03251 559 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03251 Mepo-Chr6 44446308 44448241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03251 1 434 Eukaryotic Initiation Factors Gene Family AT5G60390 73.272 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03251 K03231 - gmx:100801611 622.854