Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03234 ATGAAAGAAGAATCTACAGGATTAATCATTGGAATTTCTATAGGTGTTGTAATTGGAGTTGTTTTAGCAATTTCTGCATTGATCTGTTTTAGATATCATAGGAAGAGATCACAGATAGGGAATAGTAGTTCTCGGAGGGCGGCTGCAATACCGATTCGCACAAATGGTGCTGATTCTTGTACTATATTATCAGATTCAACCCTAGGTCCTGAGTCACCTGTAAGGTCTGGTAGAAATGGCATGAACTTCTGGATTGATGGTTTCAAGAAAAGTAACATGATTTCTGCATCTGGAATACTTGAATATTCATACAAGGACTTGCAAAAGGCAACATATAATTTTACAACACTAATAGGACAAGGTGCATTTGGTCCTGTATATAAAGCTCAAATGTCTACTGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACCAATTCTAAACAAGGGGAGAAAGAATTTCACACAGAGGTTATGTTGTTGGGAAGGTTACACCATAGAAACTTGGTAAATTTGGTTGGATATTGTGCAGAAAAGGGTCAACATATGCTTGTTTATGTTTACATGAGTAAAGGCAACTTGGCTTCCCACTTGTACAGTGAAGAGAATGGGAATCTGGGATGGGATTTGAGGGTTCATATAGCTTTAGATGTAGCAAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCTCCTGTCATCCATCGCGACATCAAATCTAACAATATTCTCTTGGATCAGTCCATGCGAGCCCGGGTTGCTGATTTCGGACTTTCAAGAGAAGAGATGGTTGATAAACATGCTGCTATTCGTGGTACCTTTGGCTATCTGGATCCTGAATATATATCATCCGGGACATTCACCAAAAAAAGTGATGTCTACAGTTTTGGAGTGTTGCTCTTTGAACTTATAGCTGGCCGAAATCCTCAGCAGGGTCTTATGGAACATGTTGAACTTGCAGCAATGAACTCTGAGGGAAAAGTTGGTTGGGAGGAGATTGTTGATTCAAAGCTTGAAGGAAAATGTGATTTCCAAGAGGTGAATGAAGTGGCAGCACTTGCATACAGATGCATCAACCGTTCCCCAAGGAAGCGGCCTTCGATGAGGGACATAGTTCAAGTATTGACTCGGATCCTTAAAGCAAGGCATCAGAGGAATCATCACAAGAAGTCTCTTTCGGCCACAACAGATGAAGTTGCAATTGATGTTGATGAGCCAGAAAATAAGGGTCATGTTACTGACCACAGAAGAGACGAATCTATAGATAGTCGCCACAGAAGAGATGAATCTATAGATAGTGCAACTGACATGTATGATTTGTAA 1320 0.4068 MKEESTGLIIGISIGVVIGVVLAISALICFRYHRKRSQIGNSSSRRAAAIPIRTNGADSCTILSDSTLGPESPVRSGRNGMNFWIDGFKKSNMISASGILEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLASHLYSEENGNLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEHVELAAMNSEGKVGWEEIVDSKLEGKCDFQEVNEVAALAYRCINRSPRKRPSMRDIVQVLTRILKARHQRNHHKKSLSATTDEVAIDVDEPENKGHVTDHRRDESIDSRHRRDESIDSATDMYDL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03234 439 MobiDBLite consensus disorder prediction 401 433 - -
Mepo6g03234 439 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03234 439 Gene3D Phosphorylase Kinase; domain 1 85 187 - -
Mepo6g03234 439 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Mepo6g03234 439 PANTHER OS01G0750732 PROTEIN 4 395 - -
Mepo6g03234 439 MobiDBLite consensus disorder prediction 384 439 - -
Mepo6g03234 439 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 187 - -
Mepo6g03234 439 CDD STKc_IRAK 118 377 - -
Mepo6g03234 439 FunFam calcium/calmodulin-regulated receptor-like kinase 1 188 396 - -
Mepo6g03234 439 Gene3D Transferase(Phosphotransferase) domain 1 188 402 - -
Mepo6g03234 439 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03234 439 SUPERFAMILY Protein kinase-like (PK-like) 104 383 IPR011009 -
Mepo6g03234 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03234 Mepo-Chr6 44278643 44283967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03234 24 374 Glycoside Hydrolase AT3G07070 39.730 6.79e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Mepo6g03234 PK_Tyr_Ser-Thr 6.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03234 - - gmx:100799586 749.584