Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03224 ATGGCTGATGATGATCAATTTCATCATTCAAGTGGAAACTGGTGGGACACAGCATCAAGAAATATGAGATTTAATCAAAGTGGAGGAACATCACAATCTTCTTCATCTTCCATAACCAACAACATAGTTGATTTTGCTTGGCAAAATTCAGATATGGTAGAAATAAAACCAAGATCTTCCATGGAAAATTCTTCTGTTGTTTTTCATGATAATCAGAAACTTCAACAACCTCAAGATTCTTCTACTTCATCTGACCCTAACTTGCATATGATGGGTTTAGGTCTTTCTTCTCATACCATGGATTGGAATCAACCATCTTTGATAGGTGAGAAGGGAACAGATAACAGTTTCAGGTCAATATTGGAAGAGAATTTGAGTTCAACAAGGAACAATTTTGAGCAAGAAAATGTGATGGGGATGTGTCAACAAGTGAATAGAAATAATTTCTCTTTGGATCAAAATCAGTTTAGTCCTCAATATAGTTCTGGAGATAGCAATGTTATTACAAGCCAATGTTTACCATCAAATTTTCAAATGGATTCTTCAGCTTTATATGGAACTCCATCAATTTTACAAGGTTCATTTGAGAACAGATCCATGACTAGTACTTTTCCATATCCAACAAATAACTATGGATTAAACTCTAATAATGAGTTGAATATTATGCCAGCTTCTAATAATTGGTCTAATAATAAAGTTCCTCAATTTTTTATGAGAACTTCACCTCCAAAACAACCAACCAATAACCAGTTACATTTTACCAACAACACCCCCTTTTGGAATGCTTCTGAGGCTCCTAATTCTATCAAGGATGTTAGGTCTACTTTCTTCCCCTCTTTGCAACCCCAATTCTCCCCCTCAAATTTTGATTCACATTCAAAGAATATATCTGAAGTGAGTGTGGTAAAGAAAAGTGGGAGTGAGCCAGCACCCAAAAGGACCCGTAACGAAACCCCATCAACTTTGCCAGCTTTTAAGGTGAGAAAAGAAAAGATGGGAGACAGAATCACTGCACTCCAACAATTAGTGTCTCCTTTTGGAAAGACTGATACAGCCTCAGTGCTTTCTGAAGCCATTGAATATATTAAATTTCTCCATGAACAGGTTACTGTTTTGAGCACCCCATACATGAAAAGTGGAGCTCCATCAGAGATTCAACAGAATTCTGGTAAATTAAAAAAATGTGAGGGCACAAAGCAAGATCTAAAAAGCCGAGGACTATGTTTGGTACCAGTTTCTAGCACATTTCCAGTGACTCATGAAACAACAGTTGATTTTTGGACACCAACATTTGGAGGGACATCAAGATAA 1311 0.3661 MADDDQFHHSSGNWWDTASRNMRFNQSGGTSQSSSSSITNNIVDFAWQNSDMVEIKPRSSMENSSVVFHDNQKLQQPQDSSTSSDPNLHMMGLGLSSHTMDWNQPSLIGEKGTDNSFRSILEENLSSTRNNFEQENVMGMCQQVNRNNFSLDQNQFSPQYSSGDSNVITSQCLPSNFQMDSSALYGTPSILQGSFENRSMTSTFPYPTNNYGLNSNNELNIMPASNNWSNNKVPQFFMRTSPPKQPTNNQLHFTNNTPFWNASEAPNSIKDVRSTFFPSLQPQFSPSNFDSHSKNISEVSVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPSEIQQNSGKLKKCEGTKQDLKSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTSR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03224 436 CDD bHLH_AtbHLH_like 322 373 IPR045239 -
Mepo6g03224 436 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 326 378 IPR036638 GO:0046983
Mepo6g03224 436 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 117 417 - -
Mepo6g03224 436 FunFam Transcription factor bHLH123 family 326 388 - -
Mepo6g03224 436 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 316 365 IPR011598 GO:0046983
Mepo6g03224 436 SMART finulus 327 371 IPR011598 GO:0046983
Mepo6g03224 436 MobiDBLite consensus disorder prediction 300 320 - -
Mepo6g03224 436 Gene3D - 326 394 IPR036638 GO:0046983
Mepo6g03224 436 MobiDBLite consensus disorder prediction 61 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03224 Mepo-Chr6 44058070 44063081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03224 251 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 61.616 1.55e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03224 - - gmx:100796549 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03224 6 44058070 44063081 Mepo6g03224 6 44058070 44063081 ECH