Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03215 ATGGTGAATTCTAAGTGGTCTTTGTTCAAAGACATCATAACATTGGCAGCTCTTTTCCTATGCAACATCATATTAGCCTTTGCAACTGACCACCAACAAGAGCAAGACAGGATTGGATCAGCACTCCCAGATCATATAGATCCTACTTCAAAACCTCTTCTTTTATGGTTCAATGGTGGTCCTGGTTGTTCATCTATTGCTTATGGTGAGGCTGAGGAAATTGGTCCTTTTCATATTAATTCAGATGGCAATACCCTTTATCTTAATCCTCATTCTTGGAATCAAGTTGCCAACATTCTTTTTATTGACTCTCCTGTTGGAGTTGGATTTTCATATTCAAATGCTTCTTCTGATATTCTCAACAATGGAGATAAGAGGACAGCTGAGGACTCTCTCATATTTCTATTGAAGTGGTTCGAGCGTTTTCCCCAGTATAAAGAAACAGACTTTTTCATTAGTGGTGAGAGCTATGCAGGACATTATGTTCCCCAACTTAGCCAAGTTATTGTCAAGTACAACTCAGCTACAAAACAAAATTCTATAAATCTCAAAGGTTACATGGTAGGAAATGCTCTAACAGATGATTTCCATGATCAATTGGGAATGTTCCAGTTTATGTGGACAAATGGTATGATTTCAGATCAAACATTCAAGCTCTTGAACCTGCTCTGTGATTTTCAGTCGGTCAAACACCCGTCAGAGTCGTGTGAAAAAATCTGGGAAATTGCTGAAAAAGAACTTGGTAATATAGATCCATACAGTATCTTTACTACTCCTTGCCATGCTAATGATAATCAGATAGTTAAAAGAAAGCATCGTGTTGGAAATCTCAGAACTGTATATGATCCTTGCACCGCGAAGCACAGCACTACATACTTCAATCTACCAGAGGTCCAAAGGATTCTACATGTTCATCCAGATCATAGGCCTGCTAAATGGCAAACCTGCAGTGCTGTGGTAGCTATTAACTGGAAGGATTCTCCTAGAACAGTGCTCAATATATACCAAGAACTTATTCCTACCAGACTGCGAATATGGATGTTCAGTGGTAATACAGATGCTGTACTCCCAGTAACATCTACTCGCTATTCCATAGATGCTCTCAAGCTTCCAACCGTGAGCCCCTGGCGTGCATGGTATGATGACGGGGAGGTAGCAGGGTGGACCCAAGAATACGTCGGACTCACGTTTGTAAATGTAAGGGGTGCAGGGCACGAAGTTCCTCTGCATAGACCAAAACTTGCTCTAGCATTGTTCAAATCGTTCTTAGCAGGAACCTCGATGCCAACTCTTGAACCACCTACCCTCGGAACCGCCTCTTGA 1323 0.4135 MVNSKWSLFKDIITLAALFLCNIILAFATDHQQEQDRIGSALPDHIDPTSKPLLLWFNGGPGCSSIAYGEAEEIGPFHINSDGNTLYLNPHSWNQVANILFIDSPVGVGFSYSNASSDILNNGDKRTAEDSLIFLLKWFERFPQYKETDFFISGESYAGHYVPQLSQVIVKYNSATKQNSINLKGYMVGNALTDDFHDQLGMFQFMWTNGMISDQTFKLLNLLCDFQSVKHPSESCEKIWEIAEKELGNIDPYSIFTTPCHANDNQIVKRKHRVGNLRTVYDPCTAKHSTTYFNLPEVQRILHVHPDHRPAKWQTCSAVVAINWKDSPRTVLNIYQELIPTRLRIWMFSGNTDAVLPVTSTRYSIDALKLPTVSPWRAWYDDGEVAGWTQEYVGLTFVNVRGAGHEVPLHRPKLALALFKSFLAGTSMPTLEPPTLGTAS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03215 440 FunFam Carboxypeptidase 331 425 - -
Mepo6g03215 440 Gene3D - 331 425 - -
Mepo6g03215 440 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 412 IPR001563 GO:0004185|GO:0006508
Mepo6g03215 440 ProSitePatterns Serine carboxypeptidases, histidine active site. 395 412 IPR033124 GO:0004185
Mepo6g03215 440 Gene3D - 284 320 - -
Mepo6g03215 440 ProSitePatterns Serine carboxypeptidases, serine active site. 152 159 IPR018202 GO:0004185
Mepo6g03215 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 102 112 IPR001563 GO:0004185|GO:0006508
Mepo6g03215 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 89 101 IPR001563 GO:0004185|GO:0006508
Mepo6g03215 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 395 408 IPR001563 GO:0004185|GO:0006508
Mepo6g03215 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 163 IPR001563 GO:0004185|GO:0006508
Mepo6g03215 440 Pfam Serine carboxypeptidase 47 424 IPR001563 GO:0004185|GO:0006508
Mepo6g03215 440 FunFam Carboxypeptidase 42 262 - -
Mepo6g03215 440 SUPERFAMILY alpha/beta-Hydrolases 47 428 IPR029058 -
Mepo6g03215 440 Gene3D alpha/beta hydrolase 41 262 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03215 Mepo-Chr6 43991224 43994538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03215 311 428 Calmodulin-binding Proteins AT2G22960 23.529 2.54e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03215 K16297 - gmx:100805227 648.662