Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03211 ATGGACAGTATCAAAGTACTAGTTTATTGCTTTCTTCTCTTCCATTTCATACCAACTTCCAATACCTTGGAAACCATTGTTCCAGGAAAATCAATCAAAGACAATGAGACACTAATCTCAGAAGATGGAACTTTTGAAGCTGGTTTCTTCAACTTTGGAAATTCAAATAACCAATATTTTGGTGTATGGTACAAGAATATTTCACCAAAAACTCTTGTGTGGATTGCAAACCGAGACGTTCCACTAGGAAACTCATCAGGAGTTTTGAATCTCACAGATAAAGGAACTCTTCTCATTGTTGATTCCAAACAGGTTATGATATGGTCCTCTAATACATCAAAAGAAGTAACAAAACCAAGTTTGCAGCTCTTGGATAGTGGAAACCTTGTTGTGAAAGATGAAACCAACCAAGATAATATTTTGTGGCAAAGTTTTGATCTTCCTGGTGACACTTTGCTCCCAGGTATGAGAATTAGAACAAACTTAGTAAATGGTGATTATAAAGGTTTGGTATCTTGGAGGGATACACAAGATCCTGCTACTGGTTTGTATTCATATCATATAGATACTAAGGGTTTTCCTCAAGTAGTGATTACAAAAGGAGACACATTATTCTTTAGAATAGGTTCATGGAATGGAAGAATTTTATCAGGAATTCCTTCTGAGACACTTTACAAAGCCTTTAACTTTTCATTTGTGATTACCGAGAAGGAGATTTCTTATGGTTATGAGCTTTTGAACAAGTCAATTGTTTCAAGATACTTGGTATCTTCAACCGGTCAAATAGCACGATACATGTTGTCGGATCAGACAAATAGTTGGCAACTTTTCTTTGTCGGACCAGCAGACAGTTGTGATAATTATGCTATCTGCGGTGCAAATTCAAACTGTGATATTGATAACTCGCCAGTATGTGAATGTCTTGAAGGTTTCGTTCCAAAATCTCAAACACACTGGAGTTCACAAAATTGGTCGGATGGTTGTGTTAGGAAAGTGAAGTTAGATTGTGACAACAGGGATGGCTTTTTAAAGCATACAAGAATGAAGTTGCCCGATACATCAAAATCTTGGTTTAATAAGAGCATGAACCTTGAAGAATGTGAGGAATTCTGTATCAGAAACTGTTCTTGTACAGCATATGCAAATTTAGATATCAGAGATGGTGGAAGTGGCTGCTTGCTTTGGTTTAATAACCTTTTGGATGTCAGAAAATTACCCTCTGGAGGACAAGACCTTTACATAAGAGTTGCAGATTCAGCTTCAGCTTCAGAACTAGGCTTGAGCAAGAAGAAGCTTGCAGGAATTCTAGCGGGCTGTATTGTGTTTATTGTGATCATACTGATAATACTGGTAGTGTCCATACATCGTGTTCGGAGGAAGAATCTAGACAAGCCAGGGAAGAATTACGAATTTAGCTTGAAGAATCACACCGACAACAAAGAGAATGAAGACATTGACATACCAATATTTGATTTATCAACCATAGCTAATTCAACCAATAACTTCTCCATTGATAATAAGTTGGGGGAAGGAGGATTTGGACCAGTTTACAAGGGTAACTTGGAAAATGGACAAGATATAGCTGTGAAAAGGCTTTGCAATACTTCAGGACAAGGACCAAAGGAATTCATAAATGAAGTTAAGCTAATTGCAAATCTTCAGCACAGAAATCTTGTGAAACTACTTGGCTGTTGCATTCATGATGATGAGAGACTCCTGATATATGAATTTATGATCAACAGAAGCTTGGACTACTTCATTTTTGATCAAACTAGGAGAAGTTTACTGCATTGGACTCAACGATTCCAAATTATCTGCGGAATTGCTCGAGGACTTCTTTATCTTCATGAAGATTCTAGGTTAAGGATTATCCACAGAGATCTCAAGACCAGCAACATTCTTCTAGACGAAAATATGAATCCTAAAATATCAGACTTTGGTCTTGCTAGAACATTATGGGGAGATGAAGCAAAAGGGGTAACAAGAAGAGTAGTAGGAACTTATGGTTACATATCTCCAGAGTATGCAGCACGTGGATTTTTCTCGGTGAAATCCGATGTCTTCAGTTTTGGTGCTATTATACTAGAGACAATTAGTGGAAACAAGAACAGGGAATATTGTGACTATCATGGCCTTGATCTTCTTGGATATGCATGGAGAATGTGGTCTGAAAAAATGTCGTTGGAACTGATAGACGAATGTCTAGGCGATTCAATTGCTGTAGCTGAACCTGAAATATTGAGATGTATTCAAATAGGACTTTTATGTGTTCAAGAGAGAGCTGATGATAGGCCAGACATGTCAGCAGTAGTTCTAATGCTGAATGGTGAGAAAGCATTGCCTAATCCAAAGGAACCGGCCTATTATCCGCGCCAACTTGGTTCTTCAGCAGAAAATAGTAAGCTGCATTCAAACAATGAAATTTCCATGACATTGCCACAAGCAAGATAG 2451 0.377 MDSIKVLVYCFLLFHFIPTSNTLETIVPGKSIKDNETLISEDGTFEAGFFNFGNSNNQYFGVWYKNISPKTLVWIANRDVPLGNSSGVLNLTDKGTLLIVDSKQVMIWSSNTSKEVTKPSLQLLDSGNLVVKDETNQDNILWQSFDLPGDTLLPGMRIRTNLVNGDYKGLVSWRDTQDPATGLYSYHIDTKGFPQVVITKGDTLFFRIGSWNGRILSGIPSETLYKAFNFSFVITEKEISYGYELLNKSIVSRYLVSSTGQIARYMLSDQTNSWQLFFVGPADSCDNYAICGANSNCDIDNSPVCECLEGFVPKSQTHWSSQNWSDGCVRKVKLDCDNRDGFLKHTRMKLPDTSKSWFNKSMNLEECEEFCIRNCSCTAYANLDIRDGGSGCLLWFNNLLDVRKLPSGGQDLYIRVADSASASELGLSKKKLAGILAGCIVFIVIILIILVVSIHRVRRKNLDKPGKNYEFSLKNHTDNKENEDIDIPIFDLSTIANSTNNFSIDNKLGEGGFGPVYKGNLENGQDIAVKRLCNTSGQGPKEFINEVKLIANLQHRNLVKLLGCCIHDDERLLIYEFMINRSLDYFIFDQTRRSLLHWTQRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAKGVTRRVVGTYGYISPEYAARGFFSVKSDVFSFGAIILETISGNKNREYCDYHGLDLLGYAWRMWSEKMSLELIDECLGDSIAVAEPEILRCIQIGLLCVQERADDRPDMSAVVLMLNGEKALPNPKEPAYYPRQLGSSAENSKLHSNNEISMTLPQAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03211 816 CDD STKc_IRAK 508 776 - -
Mepo6g03211 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 782 - -
Mepo6g03211 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 145 - -
Mepo6g03211 816 Pfam Protein tyrosine and serine/threonine kinase 503 772 IPR001245 GO:0004672|GO:0006468
Mepo6g03211 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Mepo6g03211 816 Pfam PAN-like domain 336 402 IPR003609 -
Mepo6g03211 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 764 - -
Mepo6g03211 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Mepo6g03211 816 CDD PAN_AP_plant 332 417 - -
Mepo6g03211 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 416 - -
Mepo6g03211 816 SMART serkin_6 502 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03211 816 ProSiteProfiles Protein kinase domain profile. 502 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03211 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Mepo6g03211 816 Gene3D Transferase(Phosphotransferase) domain 1 578 784 - -
Mepo6g03211 816 CDD B_lectin 31 148 IPR001480 -
Mepo6g03211 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 212 IPR036426 -
Mepo6g03211 816 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Mepo6g03211 816 MobiDBLite consensus disorder prediction 793 816 - -
Mepo6g03211 816 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Mepo6g03211 816 Pfam D-mannose binding lectin 71 174 IPR001480 -
Mepo6g03211 816 SUPERFAMILY Protein kinase-like (PK-like) 487 801 IPR011009 -
Mepo6g03211 816 Gene3D - 19 145 IPR036426 -
Mepo6g03211 816 MobiDBLite consensus disorder prediction 783 816 - -
Mepo6g03211 816 SMART ntp_6 337 416 IPR003609 -
Mepo6g03211 816 Gene3D Hepatocyte Growth Factor 333 413 - -
Mepo6g03211 816 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Mepo6g03211 816 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Mepo6g03211 816 SMART blect_4 29 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03211 Mepo-Chr6 43948289 43952229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03211 434 801 Receptor kinase-like Gene Family AT4G23190 49.869 4.64e-115 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g03211 PK_Tyr_Ser-Thr 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03211 - - ccaj:109805721 1210.28