Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03210 ATGTTTTTGATGGAAAGCTTCAAGGTACTAGTTTTGTGTTTTCTTGTATTCAACTTCATACCAACCTTCAATACCTTGGAGACCATTGTTCCAGGACAATCAATCAAAGGTAATGAGACACTAGTATCAAAATATGGAACTTTTGAAGCTGGTTTCTTCAACCTAGGAGATTCAAATAACCAATATTTTGGTGTATGGTACAAGGATATTTCACCAAAAACTGTTGTGTGGATAGCAAATAGAGATTCTCCTTTAGGAAACTCATTAGGAGTTTTTAATGTAACTGATAAAGGAAATCTTTTTATTGTTGATTCCAAAGGGGCTATGGTATGGTCCTCTAATACCTCAACAACAGCTACAAATCCAACTGTGCAGATCTTGGATAGTGGTAACCTAGTTGTGAAAGATGAAACCAGCCAAGATAAATTTTTGTGGCAAAGTTTTGATATACCTGGTGACACTTTACTCCCAGGTATGAAAATCAGAAGCAACTTAGTAAATGGTGATTCTAAAGGTTTGGTATCTTGGAGAGATACACATGATCCTTCTACTGGTTTATATTCATATATTATAGATACTAATGGTTTACCTCAAGTAGTGATTACAAAAGGAAACTCATTTTATGTCAGAATAGGTTCATGGAATGGAAATATGTTAACTGGAATTCCTTCTACGACGCTTTACTCGAACTTTAATTTCACTTTTTTTATTACTGAGAAGGAAGTTTCTTATGGATATGAACTTTTGAAGTCATCAATAGTTTCAAGGTACATGCTTACTTCGACAGGGCAAATGACGCGTTACATATGGTCGGACCAGAAAAAGAGTTTTGAACTTTTCTTTCTTGGCCCTGCAGACAGTTGTGATAACTATCTTATCTGTGGTGCAAATTCTAATTGTGATCCTAATAACACACCAGCATGTGAATGTCTTAAAGGTTTCATTCCAAAGTCTCAAGAAAAGTGGAATTCGCAAATTTGGTCGGATGGTTGTGTTAGGAGAGTTCAGTTAGATTGTGACAACAGGGATCGCTTTTTGAAACGTATGGGAATGAAGTTGCCAGATACATCAAAATCTTGGTTTAATAAGAGTATGAGCCTTGAAGAATGTGAGAAATCCTGTCTGGGAAAATGTAATTGCACAGCATATGCAAATTTAGATGTCAGAGATGGTGGAAGTGGTTGCATACTTTGGTTTAATAACATTCTTGATGCCAAAAAACTAAGAGCTGGAGGACAAGACCTTTACATAAGAGTTGCAGCTTCAGAACTAGACAATAACAAAGGCATCAACAAGAAGCTTGCTGGAATTTTAGTAGGCTGTATTATGTTTGTTTTGATCATGATAATTCTGGGAGTCTCCATATATCGCAATCGGAGGAAGAAACTAGAGCAGCCAGTGATGAATCAAGTATTTAGCTTCAAGAATCACACTGACAACAATGAGAATGAAGATATTGACATACCAATATTTGATTTATCCATCATTGCTAATGCAACCAATGACTTTTCCATTGATAACAAATTGGGGCAAGGAGGATTTGGACCGGTTTATAAGGGTAAATTGGAAAATGGACAAGATATAGCAGTGAAGAGGCTCTGCAATACTTCATCACAAGGACCAAAAGAGTTCATAAATGAAGTTAAGCTAATTGCGAATCTTCAACACAGAAATCTTGTGAAACTACTTGGCTGTTGCATTCATCTGGACGAGAGACTCTTGATATATGAATTCATGATCAACAGAAGCTTGGACTACTTTATTTTTGATCAAACTAGAAGAAGTTCATTGCATTGGGCTCGACGATTTCAAATTATTCGTGGGATTGCTCGAGGACTTCTTTATCTTCATGAAGATTCTAGATTAAGGATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGACGAAAATATGAATCCTAAAATATCAGACTTCGGTCTTGCTAGAACATTATGGGGCGATGAAGCCGAAGTGGAAACAATTAGAGTAGTAGGAACTCATGGTTACATATCTCCAGAGTATGCAGCACGTGGATTTTTCTCAGTGAAATCAGATGTCTTTAGTTTCGGTGTTATTATACTTGAGACAATAACTGGAAAAAAGAACAGGGAATATAGCGACCATCATGATCTTGACCTTCTTGGATATGCATGGAGAATGTGGTGTGAATCAACACCGTTGAAGCTGGTCGATGAATCTCTAAGCAATTTGATTGCTGTAGCCGAACCTGAAATATTGAGATGTATTCAGATAGGGCTTTTATGTGTGCAAGAGAGACCTGATGACAGACCAGACATGTCAGCTGCAGTTCTAATGCTGAATGGTGAAAAAGCATTGCCTAAGCCAAAGGAACCAGCCTTCTTTCCACACCAATTCGGCTCATCATCAGGAACTACTAAACTGTATTCAAACAATGAAGTTTCCATAACAATGTTAGAAGCAAGATAG 2454 0.3704 MFLMESFKVLVLCFLVFNFIPTFNTLETIVPGQSIKGNETLVSKYGTFEAGFFNLGDSNNQYFGVWYKDISPKTVVWIANRDSPLGNSLGVFNVTDKGNLFIVDSKGAMVWSSNTSTTATNPTVQILDSGNLVVKDETSQDKFLWQSFDIPGDTLLPGMKIRSNLVNGDSKGLVSWRDTHDPSTGLYSYIIDTNGLPQVVITKGNSFYVRIGSWNGNMLTGIPSTTLYSNFNFTFFITEKEVSYGYELLKSSIVSRYMLTSTGQMTRYIWSDQKKSFELFFLGPADSCDNYLICGANSNCDPNNTPACECLKGFIPKSQEKWNSQIWSDGCVRRVQLDCDNRDRFLKRMGMKLPDTSKSWFNKSMSLEECEKSCLGKCNCTAYANLDVRDGGSGCILWFNNILDAKKLRAGGQDLYIRVAASELDNNKGINKKLAGILVGCIMFVLIMIILGVSIYRNRRKKLEQPVMNQVFSFKNHTDNNENEDIDIPIFDLSIIANATNDFSIDNKLGQGGFGPVYKGKLENGQDIAVKRLCNTSSQGPKEFINEVKLIANLQHRNLVKLLGCCIHLDERLLIYEFMINRSLDYFIFDQTRRSSLHWARRFQIIRGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDEAEVETIRVVGTHGYISPEYAARGFFSVKSDVFSFGVIILETITGKKNREYSDHHDLDLLGYAWRMWCESTPLKLVDESLSNLIAVAEPEILRCIQIGLLCVQERPDDRPDMSAAVLMLNGEKALPKPKEPAFFPHQFGSSSGTTKLYSNNEVSITMLEAR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03210 817 Pfam Protein tyrosine and serine/threonine kinase 504 770 IPR001245 GO:0004672|GO:0006468
Mepo6g03210 817 Pfam PAN-like domain 339 404 IPR003609 -
Mepo6g03210 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Mepo6g03210 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Mepo6g03210 817 CDD B_lectin 33 151 IPR001480 -
Mepo6g03210 817 CDD PAN_AP_plant 335 420 - -
Mepo6g03210 817 Gene3D Hepatocyte Growth Factor 336 417 - -
Mepo6g03210 817 SMART serkin_6 503 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03210 817 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Mepo6g03210 817 SMART ntp_6 340 419 IPR003609 -
Mepo6g03210 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 148 - -
Mepo6g03210 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 762 - -
Mepo6g03210 817 Gene3D - 23 148 IPR036426 -
Mepo6g03210 817 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Mepo6g03210 817 SMART blect_4 32 151 IPR001480 -
Mepo6g03210 817 CDD STKc_IRAK 509 777 - -
Mepo6g03210 817 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Mepo6g03210 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Mepo6g03210 817 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Mepo6g03210 817 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Mepo6g03210 817 Pfam D-mannose binding lectin 74 177 IPR001480 -
Mepo6g03210 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 783 - -
Mepo6g03210 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 419 - -
Mepo6g03210 817 ProSiteProfiles Protein kinase domain profile. 503 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03210 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 182 IPR036426 -
Mepo6g03210 817 SUPERFAMILY Protein kinase-like (PK-like) 488 806 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03210 Mepo-Chr6 43940861 43945630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03210 425 792 Receptor kinase-like Gene Family AT4G23190 48.947 1.37e-114 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g03210 PK_Tyr_Ser-Thr 4.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03210 - - ccaj:109805721 1206.43