Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03196 ATGGGTTTATTTGTGGACCCACTTTTCTTCTATGCACTCTCTATAAGTGACACGTGTATGTGTCTGTTTTTAGATGGTTGGTTTCTAGTTACCGTCACCGTTATCCGTTGCATGACGGACATGTTACATCTCTGGAATATTTGGTTGCAGTTCTATATTCATAAACATAAACGCTCCTCTTTTGGCTTCATTCATCATGGAACGACTTCTTCTTCTAACTCCTTCTTCAAACCCAACAAAGCCTTTTTCTTTAACATCTTTATCCTCCTCCCTCTCCCTCAGATTGTGCTATGGGTGACAATTCCATCTTTGTTAGAGCAAGGATCAATTGCACGGGTGATTACTGTATTGTTGATTATGTTCCTGTTTCAATACCTTCCTAAAATTTATCATTCAATCTGCTTCGTGCGCCGGAACCTCACAAATGGTTTCATTTTTGGAACCGTTTGGTGGGGATTCGCTATCAATATGATCGCTTATTTTGTCGCTTCCCATGCAGCAGGGTCATGTTGGTATTTGTTGGGACTTCAAAGGGCAGCCAAGTGTCTAGAAGAGCAATGTGAGACAACACCTGGTTGTGGGCTAAGAACACTGTGTTGCAAAGAACCAATATACTATGGAAACTATAACATGTTGAAGAAACTAGACAGAACAAGGTTGGTTTGGTCACAGAGCACAGAAGCAAGGTCTACATGTTTAGCTAGTGCTGATAACTATGAATTTGGAGTTTATGAATGGAGTGTTCAACTTGTTACAAATAATAGCCGAATTGAAAAGATACTCCTTCCTATCTTTTGGGGCCTAATGACTCTCAGCACTTTTGGGAACCTCCAGAGCACAACAGAAAGGACGGAAGTCGTTTTCAACACTATTATATTAACTAGTGGCCTCCTTCTAGTCACTATGCTAATTGGAAACATCAAGGTATTTTTACATGCTACAACATCAAAGAAGCAAGCAATGAAATTGAAGATGACAAACTTGGAGTGGTGGATGAACAAAAGACGGTTGCCACAAGGACTTCGACAGCGTGTGCGTAACTACGAGAGACAGTGTTGGGCTGCCATGCGCGGCGTTGATGAATGTCAGTTGATAAAAAATCTCCCGGAGGGTTTGAGAAGGGATATCAAGTACCATCTTTGTTTGGGTTTGGTGAGACAGGTACCACTTTTTCAACATATGGATGAATTGGTGCTAGAGTACATCTGTGACCGTGTCAAGTCCCTTGTATTCACAAAGGGAGAAACACTAACAAGAGAAGGAGACCCAGTTCGTAGAATGCTATTTGTGGTAAGGGGTCACCTTCAAAGTAGCCAAGTCCTAAGAGATGGAGTTAAAAGTTGTTGTATGTTAGGACCAGGAAACTTCAGTGGAGATGAACTTCTATCATGGTGTTTAAGAAGACCATTTATAGAACGTCTTCCAACATCATCGTCAACTTTGGTGACGCTTACAACAGTTGAAGTATTTGGACTCGAAGCAGAGGATGTCAAATATGTGACACAAAATTTTAGGTACACATTTGCAAAAGAAAATGTTAGAAGAAGTGTTAGATATTACTCACCTGGTTGGAGAACTTGGGCTGCTGTGGCAATTCAATTGGCTTGGAGAAGGTATAGGCATAGGTTGACTTTGAGTTCTTTGTCCTTTATTAGGCCTCGAAGGCCTTTGTCAAGGTCGACTTCTTTGGAAGAGGATAGACTTCGTCTCTATACAGCTTTGCTAACCTCACCAAAGCCTAATCAAGAGGGTTTTGACTCTTCATAA 1767 0.4114 MGLFVDPLFFYALSISDTCMCLFLDGWFLVTVTVIRCMTDMLHLWNIWLQFYIHKHKRSSFGFIHHGTTSSSNSFFKPNKAFFFNIFILLPLPQIVLWVTIPSLLEQGSIARVITVLLIMFLFQYLPKIYHSICFVRRNLTNGFIFGTVWWGFAINMIAYFVASHAAGSCWYLLGLQRAAKCLEEQCETTPGCGLRTLCCKEPIYYGNYNMLKKLDRTRLVWSQSTEARSTCLASADNYEFGVYEWSVQLVTNNSRIEKILLPIFWGLMTLSTFGNLQSTTERTEVVFNTIILTSGLLLVTMLIGNIKVFLHATTSKKQAMKLKMTNLEWWMNKRRLPQGLRQRVRNYERQCWAAMRGVDECQLIKNLPEGLRRDIKYHLCLGLVRQVPLFQHMDELVLEYICDRVKSLVFTKGETLTREGDPVRRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPTSSSTLVTLTTVEVFGLEAEDVKYVTQNFRYTFAKENVRRSVRYYSPGWRTWAAVAIQLAWRRYRHRLTLSSLSFIRPRRPLSRSTSLEEDRLRLYTALLTSPKPNQEGFDSS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03196 588 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 552 - -
Mepo6g03196 588 Gene3D Jelly Rolls 388 506 IPR014710 -
Mepo6g03196 588 ProSiteProfiles cAMP/cGMP binding motif profile. 390 500 IPR000595 -
Mepo6g03196 588 CDD CAP_ED 390 496 IPR000595 -
Mepo6g03196 588 FunFam Cyclic nucleotide-gated ion channel 1 317 381 - -
Mepo6g03196 588 Gene3D Helix hairpin bin 315 381 - -
Mepo6g03196 588 SUPERFAMILY Voltage-gated potassium channels 12 310 - -
Mepo6g03196 588 SUPERFAMILY cAMP-binding domain-like 316 504 IPR018490 -
Mepo6g03196 588 SMART cnmp_10 390 516 IPR000595 -
Mepo6g03196 588 FunFam cyclic nucleotide-gated ion channel 4 388 506 - -
Mepo6g03196 588 Pfam Cyclic nucleotide-binding domain 410 500 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03196 Mepo-Chr6 43714232 43718772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03196 2 587 Ion Channels AT5G54250 72.987 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03196 K05391 - gmx:100800795 941.028