Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo6g03192 | ATGATGTTATCACCTTCACCATCTTCCATTGCAAGAAGCTCTTTAGAAGAGATGCTTGATTCGCTACGGCGGCGAGACGAAGAGGAGAAGCCTAAAGACCTACCGCCGGCATTGCCAGCAAGGCCAACGTCGAGAGGCCGGTTGCCGCCAGCGAGGAGGTCTTTGCCTAAAAGTTTTAAGGTTGACGGTGAAAATGGAAATGAAATGGGGCATAGAAGGAAGGGAAGTTTTGGAAATAAGAAGTTGATGTTGGATTTGGAATCTCCTTATGTGGTTATTTCAGAAGAGAATAGTGTTGTTAGTGAACAATCTTCACCTTGTGCTGTTTCTTCAATTCCTGTCGATGATTCTTCTGTTGCTTCTGTGGCTTCACCTTCACCGGAATTGGAAGATGATAATGTTTCTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGGAAGTGGGGACTGGGAAGAATACAGTCAACTTCTGGAGAACAAGCATCAGTTTCACTCTCAAATGGAAATGTTATGAGAGTGGCACGAACAGATCTGCTGCCAGCTAATCCTGATATTTTAGAAGGCGTGGATGATCTTATACAGCTCAGCTATTTGAACGAGCCCTCGGTTCTTCACAATCTTCGGTTTAGATATTCTCAAGATATGATTTATAGTAAAGCTGGGCCAATTTTAATTGCTCTTAATCCCTTCAAAGATGTACAGATTTACGGAAACGATTATGTCTCTGCTTACAGGAAGAAATCTCTTGATAGTCCTCACGTTTTCGCCATGGTAGATGCAGCTTATAATGAAATGATAGGAGAAGAAGTAAATCAATCCATTATCATAAGTGGCGAGAGTGGAGCTGGGAAAACAGAAACAGCGAAAATTGCGATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGATCGAAAATGAAGTTCTTCAGACAAATGTTATACTAGAAGCTTTTGGCAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAACGGGAAAAATGTGCGGGGCTAAAATTCAAACCTTCCTATTGGAAAAGTCAAGAGTCGTTCAACTGGCTAATGGCGAGAGGTCTTATCACATATTTTATCAACTTTGTGCTGGATCTTCACCTCATCTTAAAGAGAGGCTAAATCTTCGAGCGGCCAGCGAATATAAATATCTATATCAGAGTGACTGCATGGAAATTGATTGCGTTAATGATGCTAAAAAATTTCATAGGCTAAAGAAAGCATTGGACGTCGTTCAAATGTGCAATGAGGATCAAGAGCGGGTCTTTAAGATGCTCGCTGCAATATTATGGTTGGGAAATATATCATTCCATGTTAATGATAATGAAAATCACATTGAAGTGGTGAACGATGAAGCTGTAACCAGTGCTGCGTCGCTGATGGGTTGCAGTTCTCAAGGACTAATGACAGTATTATCTACCCATATAATCCAAGCTGGCAAGGATACTATCACCAAAACATTGACATTGCGGCAGGCAATTGATGCAAGAGACGCGTTAGCAAAATTTATCTATGCCAGTTTGTTTGACTGGCTTGTAGAACAAGTTAATAAGTCACTTGAAGTTGGTAAACGCCGTACTGGGAGATCCATAAGTATCCTTGACATTTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTGTGCATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAACCGGCATCTTTTTAAACTGGAGCAACAGGACTACGAAATAGATGGCGTTGATATGACCAAAGTAGATTTCGAGGACAATCAAGAGTGCTTGGATCTTTTTGAGAAGAAGCCTATAGGTCTACTTTCTCTATTGGACGAGGAATCAAATTTTCCAAGGGCCACTGATCTAACACTTGCCAACAAACTTAGGCAGCACCTGCAAGCTAATCCTCGCTTTAAAGGGGAATGGGGAAAGGGTTTCAGTGTTGGTCATTATGCAGGAGAGGTTGTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATCCGATGCCTTCTGATTCTATTCAACTACTATCATCATCTAGTTGTGAACTGCTGCGGTCGTTCTCCAAGACGCTTAACCAGTCTCAGAAGCAATCAAATTCCCAGCACATAGGGGCTCTGGATTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGTTGGAGAGCACTACGCCTCACTTTATTCGCTGTATAAAGCCAAATGCTAAGCAACTTCCTGGCATATATGATGAAGATCTTGTTCTCCAGCAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGGGCCGGATATCCTACTAGAATGACACATCAAGAGTTTGCCAGAAGGTATGAGTTTCTGCTCTATGAGGCCAATACATCTCAAGATCCCTTGAGTGTCTCGGTTGCTGTTTTGCAACAATTTAATATCCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACCGGGCAGGTTGGTGCATTGGAGGATAAGAGAAAATTGGTTTTGCAGGGAGTACTCGGGGTTCAAAAATGGGTTCGGGGTCATCAAGCTCGCAGTCATTACGATAAACTTAAGAATGGAGTGACAACTTTACAATCATTTGTTCATGGAGAAATTGCAAGAAGGAAATATGGTGTTATGGTGAAGTCTTCTATTACTATTTCTTCTGAAAATATCGAGGAGATAGAGGCTATCATACTACTACAATCTGTAATTCGTGGGTGGTTGGTTCGGAGGCATAATAGTAGCCTATGTAAGTTTAAGATACATCCTGAGAATGGAAAAACTAGGCGAAGGTCACGCTTGAAGATGTCAGAAGACAAGGATGCATCGAAAGATCGGAGTCAAAATCTGCCTTCGGCTTTAGCAGAACTCCAAAGACGGGTTGTCAAGGCCGAATCAACTATAGAGCAAAAAGAAGAGGAAAATGCCGAGTTGAGGGAACAACTAAAACAATTTGAGAAAAGGTGGATTGAATACGAGACAAGGATGAAAACAATGGAGGAAATGTGGCAACGACAAATGTCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAAGCAGCCTTGCTTCTGAGAATGCAAATGGTCAACCTTCAAGACATGATGTTGCATCACCATCACCTTTCTGTTATGATTCCGAGGATGCTACATCAATGGGATCTCGAACTCCTCGAACACCCGGTTGCAACACACCTTTGAAGTATTCTAGCAGTCTTTCCGAAGTCAAAGCAATGAGAGATGGCAACGGTAGTTTGGGCAATCTGATGAAAGAGTTTGAGCAGCGCAGTCAGACATTCGATGAAGATGCAAGGGCTTTGGTCGAGGTAAGAACAACAGGGCAGTCTGCGAATCCACCTTCCATTGAAGAACTGCGGAAACTCAAACACAGGTTTGAAGGATGGAAGAAAGAATACAAGATGCGATTAAAGGAAACGAAAGCAAGACTAAAATTACGGAATTCAGAAATGGAAAAAAGTCGGCGGAGATGGTGGGGGAAATTGAGTTCTAGAGCACAATAA | 3609 | 0.4184 | MMLSPSPSSIARSSLEEMLDSLRRRDEEEKPKDLPPALPARPTSRGRLPPARRSLPKSFKVDGENGNEMGHRRKGSFGNKKLMLDLESPYVVISEENSVVSEQSSPCAVSSIPVDDSSVASVASPSPELEDDNVSYFIKKKLHVWCRQPRGKWGLGRIQSTSGEQASVSLSNGNVMRVARTDLLPANPDILEGVDDLIQLSYLNEPSVLHNLRFRYSQDMIYSKAGPILIALNPFKDVQIYGNDYVSAYRKKSLDSPHVFAMVDAAYNEMIGEEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSCGIENEVLQTNVILEAFGNAKTSRNDNSSRFGKLIEIHFSTTGKMCGAKIQTFLLEKSRVVQLANGERSYHIFYQLCAGSSPHLKERLNLRAASEYKYLYQSDCMEIDCVNDAKKFHRLKKALDVVQMCNEDQERVFKMLAAILWLGNISFHVNDNENHIEVVNDEAVTSAASLMGCSSQGLMTVLSTHIIQAGKDTITKTLTLRQAIDARDALAKFIYASLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQLCINYANERLQQHFNRHLFKLEQQDYEIDGVDMTKVDFEDNQECLDLFEKKPIGLLSLLDEESNFPRATDLTLANKLRQHLQANPRFKGEWGKGFSVGHYAGEVVYDTNGFLEKNRDPMPSDSIQLLSSSSCELLRSFSKTLNQSQKQSNSQHIGALDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNAKQLPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFARRYEFLLYEANTSQDPLSVSVAVLQQFNIPPEMYQVGFTKLYLRTGQVGALEDKRKLVLQGVLGVQKWVRGHQARSHYDKLKNGVTTLQSFVHGEIARRKYGVMVKSSITISSENIEEIEAIILLQSVIRGWLVRRHNSSLCKFKIHPENGKTRRRSRLKMSEDKDASKDRSQNLPSALAELQRRVVKAESTIEQKEEENAELREQLKQFEKRWIEYETRMKTMEEMWQRQMSSLQMSLAAARSSLASENANGQPSRHDVASPSPFCYDSEDATSMGSRTPRTPGCNTPLKYSSSLSEVKAMRDGNGSLGNLMKEFEQRSQTFDEDARALVEVRTTGQSANPPSIEELRKLKHRFEGWKKEYKMRLKETKARLKLRNSEMEKSRRRWWGKLSSRAQ | 1202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo6g03192 | 1202 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 144 | 944 | IPR027417 | - | |
| Mepo6g03192 | 1202 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Mepo6g03192 | 1202 | FunFam | Unconventional myosin-XIX | 563 | 752 | - | - | |
| Mepo6g03192 | 1202 | Gene3D | - | 868 | 914 | - | - | |
| Mepo6g03192 | 1202 | Gene3D | - | 796 | 864 | - | - | |
| Mepo6g03192 | 1202 | FunFam | Myosin heavy chain | 375 | 431 | - | - | |
| Mepo6g03192 | 1202 | Pfam | IQ calmodulin-binding motif | 926 | 943 | IPR000048 | GO:0005515 | |
| Mepo6g03192 | 1202 | Pfam | IQ calmodulin-binding motif | 871 | 884 | IPR000048 | GO:0005515 | |
| Mepo6g03192 | 1202 | MobiDBLite | consensus disorder prediction | 961 | 977 | - | - | |
| Mepo6g03192 | 1202 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 432 | 540 | - | - | |
| Mepo6g03192 | 1202 | ProSiteProfiles | Myosin motor domain profile. | 192 | 862 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mepo6g03192 | 1202 | MobiDBLite | consensus disorder prediction | 1182 | 1202 | - | - | |
| Mepo6g03192 | 1202 | MobiDBLite | consensus disorder prediction | 17 | 35 | - | - | |
| Mepo6g03192 | 1202 | MobiDBLite | consensus disorder prediction | 1051 | 1096 | - | - | |
| Mepo6g03192 | 1202 | CDD | MYSc_Myo8 | 206 | 850 | IPR036022 | - | |
| Mepo6g03192 | 1202 | Gene3D | - | 563 | 752 | - | - | |
| Mepo6g03192 | 1202 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 139 | 188 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Mepo6g03192 | 1202 | Pfam | Myosin head (motor domain) | 194 | 850 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mepo6g03192 | 1202 | ProSiteProfiles | IQ motif profile. | 887 | 916 | IPR000048 | GO:0005515 | |
| Mepo6g03192 | 1202 | FunFam | Myosin IE heavy chain | 432 | 540 | - | - | |
| Mepo6g03192 | 1202 | ProSiteProfiles | IQ motif profile. | 924 | 951 | IPR000048 | GO:0005515 | |
| Mepo6g03192 | 1202 | MobiDBLite | consensus disorder prediction | 1051 | 1065 | - | - | |
| Mepo6g03192 | 1202 | PANTHER | MYOSIN | 185 | 1189 | - | - | |
| Mepo6g03192 | 1202 | MobiDBLite | consensus disorder prediction | 958 | 987 | - | - | |
| Mepo6g03192 | 1202 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
| Mepo6g03192 | 1202 | Gene3D | - | 375 | 431 | - | - | |
| Mepo6g03192 | 1202 | Coils | Coil | 985 | 1026 | - | - | |
| Mepo6g03192 | 1202 | SMART | iq_5 | 886 | 908 | IPR000048 | GO:0005515 | |
| Mepo6g03192 | 1202 | SMART | iq_5 | 923 | 945 | IPR000048 | GO:0005515 | |
| Mepo6g03192 | 1202 | SMART | iq_5 | 863 | 885 | IPR000048 | GO:0005515 | |
| Mepo6g03192 | 1202 | MobiDBLite | consensus disorder prediction | 1074 | 1096 | - | - | |
| Mepo6g03192 | 1202 | ProSiteProfiles | IQ motif profile. | 866 | 893 | IPR000048 | GO:0005515 | |
| Mepo6g03192 | 1202 | SMART | MYSc_2a | 186 | 863 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mepo6g03192 | 1202 | Coils | Coil | 1169 | 1192 | - | - | |
| Mepo6g03192 | 1202 | PRINTS | Myosin heavy chain signature | 319 | 346 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mepo6g03192 | 1202 | PRINTS | Myosin heavy chain signature | 604 | 632 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mepo6g03192 | 1202 | PRINTS | Myosin heavy chain signature | 222 | 241 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mepo6g03192 | 1202 | PRINTS | Myosin heavy chain signature | 551 | 579 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mepo6g03192 | 1202 | PRINTS | Myosin heavy chain signature | 276 | 301 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mepo6g03192 | 1202 | Gene3D | Kinesin motor domain | 191 | 795 | IPR036961 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo6g03192 | Mepo-Chr6 | 43669291 | 43679871 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo6g03192 | 1 | 1196 | Myosins gene family | AT5G54280 | 61.290 | 0.0 | 1515 |