Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03185 ATGAACGGAAAGGCCAACGTTACCAAAGAGCTTAACGCTAAACACAAGAAGATACTAGAAGGACTTCTTAAACTACCAGAGAATCGGGAATGTGCTGACTGCAAAGCTAAAGCTCCAAGATGGGCAAGTGTAAATCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAAGTTTGGGGGTACATATATCAAAGGTTCGTTCTGCAACTCTTGACACTTGGCTTCCAGAGCAAGTTGCATTCATTCAATCAATGGGAAACGAGAAAGCAAATAGCTACTGGGAAGCAGAATTACCTCCACAGTACGACAGAGTTGGACTTGAAAATTTCATTCGCGCAAAGTATGAAGACAAGAGATGGGTTTCAAGGGATGGGAATCCAAAAACACCTTCTGGAATGCGTGAAGATAAATCTCCTTCACATCGGCAGAGACCTGAAGAAAATAGTGGACATGGTTATGCCACTGTTGCTGAGAATACTTTTGAAGAAAGGAAGAAAATCCAACCATCTAATGCAGTTCCTGCTACAAGACGTAGGGTTCCAGCTCCTCGCAAGGTACCGGAGCAGGTAACTCCTGCTAGTGCGACCCAACCTCAGCACACTGAGAAAGTTGAACCAGTAGCCCCGCAACAACAAGCTGAAACTTCAAAGCCGGCTACTCCAGCTCAAATTACCCCTCCCAAAGTAGACTATGCTACAGACCTTTTCAACATGTTGTCTATGGATGATGCAAATGAAAATGTCTCCAAAGCTGCTGGTGCTACTGCTGATGATATCAACTGGGCAGGCTTTCAGTCTGCTGCAGAGGTGTCAACGGCCGAGAAGACTGGTCCACCAAACGCAGTTGAGAGTAGTCCTCTGTCTGCACCTGGAATTGAGGATCTATTTAAAGATTCATTTTCTGTGACACCAAGTCTAACTCCAGTAAAACCACAGAAAGATGTTAAAAATGATATAATGAGCCTCTTTGAGAAGAGCAATATTGTATCTCCATTTTCAATGCATCAACAACAGCTTGCCATGCTAGCACAACAGCAGTCTCTTCTGATGGCTGCTGCAGCTAAATCTACCGGTGTGGATCTCAAGTATCCTACTGGCATGCAACAGCCGAGTCCCAATGTTTCTGTCCAAAATTGGCCGACTACTGGATTCCCGGTATCTGGAGTAGTGCCCATTGGTGTTCAGGGAGAGTTGCAGAATCATATGCAGACTAGGAACATGGCACCAGCATATCCGGCAGGGAACTCTGTTCAATATCCACCATCTGGTTTCTATGGTATAGGACAAGCTGGTCCAGTCAATGGTATGATGACAGTGGGAGCGAATAAGCCTCAGTCAACTCCAGCGTCGTCAACCACTTCCAAGTCAGCAAAGGAGTACGATTTTTCCTCCTTAACACAAGGGATGTTTGCAAAACAATGA 1428 0.4503 MNGKANVTKELNAKHKKILEGLLKLPENRECADCKAKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPQYDRVGLENFIRAKYEDKRWVSRDGNPKTPSGMREDKSPSHRQRPEENSGHGYATVAENTFEERKKIQPSNAVPATRRRVPAPRKVPEQVTPASATQPQHTEKVEPVAPQQQAETSKPATPAQITPPKVDYATDLFNMLSMDDANENVSKAAGATADDINWAGFQSAAEVSTAEKTGPPNAVESSPLSAPGIEDLFKDSFSVTPSLTPVKPQKDVKNDIMSLFEKSNIVSPFSMHQQQLAMLAQQQSLLMAAAAKSTGVDLKYPTGMQQPSPNVSVQNWPTTGFPVSGVVPIGVQGELQNHMQTRNMAPAYPAGNSVQYPPSGFYGIGQAGPVNGMMTVGANKPQSTPASSTTSKSAKEYDFSSLTQGMFAKQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03185 475 CDD ArfGap 19 117 - -
Mepo6g03185 475 MobiDBLite consensus disorder prediction 123 150 - -
Mepo6g03185 475 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 475 IPR044520 GO:0005096
Mepo6g03185 475 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Mepo6g03185 475 MobiDBLite consensus disorder prediction 192 224 - -
Mepo6g03185 475 MobiDBLite consensus disorder prediction 442 475 - -
Mepo6g03185 475 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Mepo6g03185 475 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Mepo6g03185 475 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Mepo6g03185 475 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Mepo6g03185 475 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Mepo6g03185 475 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Mepo6g03185 475 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Mepo6g03185 475 MobiDBLite consensus disorder prediction 123 228 - -
Mepo6g03185 475 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03185 Mepo-Chr6 43598469 43604053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03185 16 118 C2H2 Transcription Factor Family AT4G05330 51.351 1.02e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03185 K12486 - gmx:100780452 671.003