Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03179 ATGGTGATGATGGTGAAGCTTGTTTTGGTTGTTGTTACTATTCTTATTGCATTTTTGGTGAATGTGTCATTTGCCTTATACACACCTCATGATAATTATCTAATTGCTTGTGGTTCATCCAAAAGTATAAACTTTCAAGATCGTGTATTTGTCCCTGATTCACAGCATTCTACACTAGTGTTAAAAACTGGAAATTCAGTTGTTGTTGGTAGTTCAAATTCAAGTGTTGTTCCATCTCCAATTTACCAATCAGCTAGGATTTTCACTGAGAGAGGTTCATATAGATTTGATGTTCAACAAGGTAGGCATTGGATTAGGCTATATTTTTATCCTCTTCCAAACAGTTTACATAATTTGACTTCAGCTTCTGTAACAGTTGTTAGTGATGATTTTGTTCTATTAAGCAACTTCACTTTTAGAAACTATAGTGGTTCGTATATGTTTAGGGAGTATGCTATCAATGTAACCTCTGATACCTTGACTGTAACCTTCATTCCTTCGAATGGTTCAGTTGCTTTTGTGAATGCAATTGAAGTTGTGTCAATGCCGGATGATTTGTTTGTCGATCAGGCATTGGCACTCAGTCCATTGGCCCCTTTTAATGGTCTTTCCGAACTTGCTTTCGAAACTGTTTACCGTTTGAACATAGGAGGAGACTTGCTTACTGCCGAAAATGACACGTTGGGAAGGACTTGGGAGAATGATCAGAAGTACCTTCATGTGAACAGTTCGGTCACTAATGTGTCGGTCAGCCCTACAAGCATTAAGTATCGACCGGGCGTTACTGCTGAGACAGCACCTAATTGGGTCTATGCTACTGCGGAAGCAATGGGGGATGCAAATGTAGCCAATTCAAATTTCAACATAACTTGGGTTTTCCCTGTAGATCCAAATTTCTCCTATTTTGTTCGGCTGCACTTTTGCGATATTATTAGCAAGGCGATGAACACGTTAGTTTTCAATGTGTTCGTAAATACTGATATAGCCATTGGAAGCCTTGACCTCTCATCTTTGACAAATGATTTGGCTTTGCCTTACTATAAGGACTTTGTTTCCAATGCTACATCGGACAACTTTTTGACGGTAAGCGTCGGTCCTGATACGATGGCAGACATTACAAATGCAACTATGAATGGATTGGAGATAATGAAAATCAGCAATGCATTGAAGAGCTTGGATGGACTTTCGTCGGTCAAGAGTTTGCTTCCCAGTTCAAAATCAAAAAAGAACAAGATAGGAATCATCATTGGCTCTGCTGCTGGTGCTGTTGTTGCCTTTGCTTTTGTTGGTTTGTGTGTTTGCTTGTTGGCGAGGAGAAAATCAAAGTCTTCTCCTCAAGAGGGTGGTCATTCATGGCTGCCATTGCCCTTATATGGAAATTCTCAAACAATTACAAAAATGTCGACAACTTCACAGAAGAGTGGAGGAACTGCAAGCTTCATTTCTTCGACGAATCTCGGACGGTTCTTCACTTTCCAAGAAATCTTAGACGCAACAAATAAATTTGATGAGAAGCTTCTTCTTGGTGTTGGTGGTTTCGGTAGGGTTTATAAGGGAATCCTTGATGATGGTACCAATGTAGCTGTTAAAAGGGGAAATCCAAGATCCGAACAAGGTCTTGCTGAATTCCGAACTGAAATCGAGATGTTATCGAAGCTTCGCCATCGTCATCTTGTGTCTCTAATTGGTTACTGTGATGAGAGGTCAGAAATGATTCTTGTCTACGAATACATGGCTAATGGTCCCCTCAGGAGTCATTTGTATGGAACAGATCTACCGCCGTTATCGTGGAAACAACGGCTTGATATTTGCATCGGAGCAGCAAGAGGTCTTCATTATCTCCACACCGGTGCATCTCAAAGTATAATTCACCGAGATGTAAAGACGACAAACATTCTTTTAGATGATAACTTTGTTGCTAAAGTTGCTGACTTTGGCCTCTCCAAAACCGGTCCTGCACTCGATCAGACTCATGTTAGCACAGCGGTTAAAGGTAGTTTCGGTTATCTTGATCCAGAATACTTTAGAAGGCAACAACTCACAGAGAAATCAGATGTTTATTCATTTGGAGTAGTTTTAATGGAAGTGCTATGCACAAGACCGGCGTTGAACCCCGTCCTTCCTAGAGAACAGGTTAATATAGCCGAGTGGGCGATGAACTGGCAGAAGAAGGGAATGCTTGATCAAATCATGGATCAACAACTTGTCGGGAAGGTCAATCCTGCTTCTCTTAAGAAGTTCGGGGAGACCGCGGAGAAGTGCTTGGCCGAGTATGGAGTGGATAGACCATCCATGGGAGATGTTTTATGGAATCTTGAATATGCTTTGCAGCTCCAAGAAACCTCGTCAGCACTCATGGAACCAGAAGACAACAGCACGAACCACATTACTGGAATTCAGTTGACACGTCTTGAGAATTTTGAGAACAGTGTGAGTATGGTTGATGGATGCAACTCTGTCACAGACGATGACGCAGAAGATGCTGCTACAAGTGCAGTGTTCTCTCAATTGGTAAATCCACGCGGAAGATGA 2532 0.4151 MVMMVKLVLVVVTILIAFLVNVSFALYTPHDNYLIACGSSKSINFQDRVFVPDSQHSTLVLKTGNSVVVGSSNSSVVPSPIYQSARIFTERGSYRFDVQQGRHWIRLYFYPLPNSLHNLTSASVTVVSDDFVLLSNFTFRNYSGSYMFREYAINVTSDTLTVTFIPSNGSVAFVNAIEVVSMPDDLFVDQALALSPLAPFNGLSELAFETVYRLNIGGDLLTAENDTLGRTWENDQKYLHVNSSVTNVSVSPTSIKYRPGVTAETAPNWVYATAEAMGDANVANSNFNITWVFPVDPNFSYFVRLHFCDIISKAMNTLVFNVFVNTDIAIGSLDLSSLTNDLALPYYKDFVSNATSDNFLTVSVGPDTMADITNATMNGLEIMKISNALKSLDGLSSVKSLLPSSKSKKNKIGIIIGSAAGAVVAFAFVGLCVCLLARRKSKSSPQEGGHSWLPLPLYGNSQTITKMSTTSQKSGGTASFISSTNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYKGILDDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMNWQKKGMLDQIMDQQLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTRLENFENSVSMVDGCNSVTDDDAEDAATSAVFSQLVNPRGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03179 843 FunFam Putative receptor-like protein kinase 32 183 - -
Mepo6g03179 843 Pfam Protein tyrosine and serine/threonine kinase 507 768 IPR001245 GO:0004672|GO:0006468
Mepo6g03179 843 Gene3D Phosphorylase Kinase; domain 1 461 577 - -
Mepo6g03179 843 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Mepo6g03179 843 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03179 843 Gene3D - 206 387 - -
Mepo6g03179 843 Gene3D - 32 183 - -
Mepo6g03179 843 FunFam receptor-like protein kinase FERONIA 464 577 - -
Mepo6g03179 843 FunFam Receptor-like protein kinase FERONIA 578 794 - -
Mepo6g03179 843 PANTHER OS07G0166700 PROTEIN 488 779 IPR045272 GO:0004714|GO:0006468
Mepo6g03179 843 Pfam Malectin-like domain 35 385 IPR024788 -
Mepo6g03179 843 CDD STKc_IRAK 508 773 - -
Mepo6g03179 843 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03179 843 Gene3D Transferase(Phosphotransferase) domain 1 578 797 - -
Mepo6g03179 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Mepo6g03179 843 SUPERFAMILY Protein kinase-like (PK-like) 479 773 IPR011009 -
Mepo6g03179 843 FunFam Receptor-like protein kinase FERONIA 207 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03179 Mepo-Chr6 43559244 43562073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03179 27 843 Receptor kinase-like Gene Family AT3G46290 52.948 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo6g03179 Malectin_like 7.9e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03179 - - gmx:100809700 1334.32