Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03172 ATGTCCAAACTGTGTTTATGTGATATTCAATATATTGGCACAATCTCACATGGGATGGAGAGTTCTCAAGCGAATTTTATTGACGAAGGCTCGAAGTTCCTTGTCTCAAAGAATAGAAATTTTGCTTTTGGTTTTGTCACCACCGTTAATGACACCACCAAGTTTCTATTAGTAATCGTCCACGCGGCTAGCTCCACCGTGCTTTGGACTGCTAATAGAGCATTACCAGTTTCCAATTATGATAATTTCGTGTTTGATACAAAAGGAAATGCCTATTTACAAAAAGATGGAACAGTGATCTGGTCTACAAACACAATTAGCAAAACAATGGAATTGCAAGACACTGGAAATTTGGTTTTGCTTGGTTACGACGACAATAATACGGTAATTTGGCAAAGTTTTAGTTATCCAACTGATACTTTGATGCATTCACAGGATTTCAAAGAGGGAATGAAACTTACCAGTGAACCTAGTTCAAATAACTTGACCTATGTTCTTGAGATCAAATCTGGTGATGTTATTCTTTCAGCTCGTTTCAAAACTCCACAAACTTATTGGACTATGCAGAATGATAACCGTAAAATCGTTGATAAGGTTGGCCATGTTGTGGCTTTTGCAAAACTCAGAGACAATTCTTGGAGATTCTATGATAACAATAGGTCTTTGTTATGGCAATTCATTTTCTCTGTTGATGCAGGTATAAATGCAAGCTGGATTGCAGTTTTGGGAAAAGATGGTGTCATTACTTTCACTAATCTCAACGGTGGTGGATCAAATGGTGATTCCTCAACAAGAATACCAAAAGATCATTGTGATACACCAGAACCTTGTGATCCCTACAACATTTGTGCAAATAACCGTAGGTGCAGCTGTCCTTCTGTTCTTGCTCCTAGTAGTTGTAAACCAGGTTTTGTCTCTCCTTGTGATGATGATAAATCAGAAAAGTCTATTGAATTTCTGAAAGCTGATGATGGACTTAGTTACTTTGCACTTGATTTTCTTCATCCCTATTTGAATACTGATTTAGCCGGTTGTCAAACATCTTGTCGTGGAAACTGCTCTTGTCTTGCAATGTTCTTCCATACAAGTTCAGGGAAGTGTTTCTTGTTGGACAGTGTTGGAAGTTTTCGGAAATCCGATGATACTGATTCTGGTTATGTTTCTTACATTAAGGTCTCAAGTCATGGAAGTGGAAGTAGCAATAAGCACATCATAATTATTGCTGTCGTCGTTGTCATATTAACTTTGCTCGTTCTTCTCTTTGTGGTGATTCTATATTGCAGGAAAAAGCAAAAGTTACCCGCAGAGAATTCTGAAGAAGACAATTTCTTGGAGAATTTAACCGGCATGCCAATCCGTTTCCGCTATAAAGATCTTGAAGTTGCAACTAATAACTTCTCTGTGAAGCTAGGTCAAGGAGGTTTTGGATCAGTTTATAAAGGACTTCTACCTGATGGGACTCGATTAGCTGTGAAGAAGCTAGAAGGTATTGGTCAAGGAAAGAAAGAGTTCAGAGCTGAAGTTAGCATCATTGGTCGCATTCATCACCTTAATCTGGTAAGGCTTAAGGGATTTTGTGCAGATGGAACTCATAGACTTCTAGTGTATGAGTATATGAGTAATAACTCATTGGATAAATGGATATTCAAGAAGACGAAAAGTGAATTATTTCTTTTGGATTGGGATACAAGGTTTAGTATTGCATTAGGAACAGCAAAAGGACTTGCTTATCTGCATCAAGAGTGTGACTCAAAGATTGTTCATTGTGACATTAAACCTGAAAATGTACTTCTTGATGATCATTTCATTGCCAAAGTTTCAGATTTTGGTTTAGCCAAGCTTATGAATAGAGAACAAAGCCATGTTTTTACAACACTAAGAGGAACCCGTGGCTACCTTGCACCTGAGTGGATAACAAACTATGCTATATCAGAGAAAAGTGATGTATACAGTTATGGGATGGTCTTACTAGAGATAATTGCAGGAAGGAAGAATTATGATCCTAATGAGACTTCGGAGAAATCGAATTTCCCTCGTTTTGCTTTTAAGATGATGGAAGAAGGGAAAGTGAGAGATATACTTGATTCAGAGTTGAAAATAGATGATGAGAATGATGATAGGGTTCATTGTGCTATAAGTGTAGCATTGTGGTGTATACAGGAAGACATGTCAATGAGACCTTCCATGACAAAAGTTGTTCAAATGTTAGAGGGTCTTTGCACTGTTCCTAAACCACCAAAATCCTCCAATGAAGGAAACACCTCCTCTTCTTCTGATGCTTATCTATCAGCAGTTAGTCTTTCAGGCCCAAGATAG 2316 0.3787 MSKLCLCDIQYIGTISHGMESSQANFIDEGSKFLVSKNRNFAFGFVTTVNDTTKFLLVIVHAASSTVLWTANRALPVSNYDNFVFDTKGNAYLQKDGTVIWSTNTISKTMELQDTGNLVLLGYDDNNTVIWQSFSYPTDTLMHSQDFKEGMKLTSEPSSNNLTYVLEIKSGDVILSARFKTPQTYWTMQNDNRKIVDKVGHVVAFAKLRDNSWRFYDNNRSLLWQFIFSVDAGINASWIAVLGKDGVITFTNLNGGGSNGDSSTRIPKDHCDTPEPCDPYNICANNRRCSCPSVLAPSSCKPGFVSPCDDDKSEKSIEFLKADDGLSYFALDFLHPYLNTDLAGCQTSCRGNCSCLAMFFHTSSGKCFLLDSVGSFRKSDDTDSGYVSYIKVSSHGSGSSNKHIIIIAVVVVILTLLVLLFVVILYCRKKQKLPAENSEEDNFLENLTGMPIRFRYKDLEVATNNFSVKLGQGGFGSVYKGLLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGRIHHLNLVRLKGFCADGTHRLLVYEYMSNNSLDKWIFKKTKSELFLLDWDTRFSIALGTAKGLAYLHQECDSKIVHCDIKPENVLLDDHFIAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIAGRKNYDPNETSEKSNFPRFAFKMMEEGKVRDILDSELKIDDENDDRVHCAISVALWCIQEDMSMRPSMTKVVQMLEGLCTVPKPPKSSNEGNTSSSSDAYLSAVSLSGPR 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03172 771 ProSitePatterns Protein kinases ATP-binding region signature. 470 493 IPR017441 GO:0005524
Mepo6g03172 771 Gene3D Phosphorylase Kinase; domain 1 427 538 - -
Mepo6g03172 771 Gene3D - 21 136 IPR036426 -
Mepo6g03172 771 MobiDBLite consensus disorder prediction 743 771 - -
Mepo6g03172 771 Gene3D Transferase(Phosphotransferase) domain 1 539 759 - -
Mepo6g03172 771 CDD PAN_AP_plant 304 393 - -
Mepo6g03172 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Mepo6g03172 771 FunFam serine/threonine-protein kinase PBS1-like 432 538 - -
Mepo6g03172 771 SMART blect_4 25 137 IPR001480 -
Mepo6g03172 771 Pfam D-mannose binding lectin 66 147 IPR001480 -
Mepo6g03172 771 MobiDBLite consensus disorder prediction 746 771 - -
Mepo6g03172 771 ProSiteProfiles Protein kinase domain profile. 464 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03172 771 ProSiteProfiles Bulb-type lectin domain profile. 18 133 IPR001480 -
Mepo6g03172 771 SMART serkin_6 464 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03172 771 FunFam S-receptor-like kinase 5 539 745 - -
Mepo6g03172 771 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 188 IPR036426 -
Mepo6g03172 771 CDD STKc_IRAK 470 739 - -
Mepo6g03172 771 SUPERFAMILY Protein kinase-like (PK-like) 444 737 IPR011009 -
Mepo6g03172 771 PIRSF SRK 2 768 IPR024171 GO:0004674
Mepo6g03172 771 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 27 748 - -
Mepo6g03172 771 CDD B_lectin 30 137 IPR001480 -
Mepo6g03172 771 Pfam Protein kinase domain 468 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03172 Mepo-Chr6 43443210 43445525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03172 392 748 Receptor kinase-like Gene Family AT5G20050 44.327 2.70e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo6g03172 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03172 - - tpra:123882999 1119.76