Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03171 ATGGGAACAAAACATTTGTTTTTATCGAACGTTGTTGTTGGTCTGTCCATCTCCATCCTCCTGACCATGTCCAAACTGTGTTTGTCTGATACTCAATATATTGGCACAATCTCACCTGGGATGGAAGCTTCTCAAGTGAATTTTATTGACGAAGGCTCGAAGTTCCTTGTCTCAAAGAATAGAAATTTTGCTTTTGGTTTTGTCACCACCATTAATGACGCCACCAAGTTTCTATTAGTAATCGTCCACATGGCTAGCTCCACCGTGCTTTGGACTGCTAATAGAGCATTACCAGTTTCCAATATTGATAATTTTGTGTTTGATAGAAAAGGAAATGCCTATTTACAGAGGGATGGAACTGTGATCTGGTCTACAAACACAATTAGCAAAACAATGGAATTGCAAGACACTGGAAATTTGGTTTTGCTTGGTAACGACGACAATAATACGGTAATTTGGCAAAGTTTTAGTTATCCAACTGATACTTTAATGCCTTCACAGGACTTCAAAGAGGGAATGAAACTTACCAGTGAACCTAGTTCAAATAACTTGACTTATGTTCTTGAGATCAAATCTGGTGATGTTATTCTTTCAGCTAGTTTCAAAACTCCACAGACTTATTGGACTATGCAGAAGGATGGTCGTAAAACAATTAACAAGAACGGCAATGTTGTGGCTTTTGCAAATCTCAGTGACAATTCTTGGAGATTCTATGATAACAATAGGTCTTTGTTATGGCAATTCATTTTCTCTGATATATATGCAAGTTGGATTGCAGTTTTAGGCAAAGACGGTGTCATTACTTTCTCGAATCTCAACGGTAGTGGATCAAACGGTGATGATTTACTAAGAATACCAAGAGATCCTTGTGGTACACCAGAACCTTGTGATCCCTACGGAATATGCTCAAACAACCGTATGTGTAGCTGTCCTCTTGTTCTTCTTCCTAGTTGTAAACCGGGTTTTGCCTCTCCTTGCGATGATGAATCAAAAAGATCTGTTGAATTTCTGAAAGTTGATGATGGACTTGGTTACTTTGCGCTTGATTTTCTTCATCCCTATTCGAATACTGATTTATCCAGTTGTGAAACATCTTGCCGTGGAAATTGCGCTTGTCTTGCAATGTTCTTTCATAGAAGTTCAGGGAAATGTTTCTTGTTGGACAGTGTTGGAAGTTTTCAGAAATCTGATGATGCTAATTCTTCTGGTTATGTTTCTTACATTAAGGTTGCTCGTGATGGAGGTCAAAGAAGCAATAAGCACATCATAGTTGTTGTGATTGTTGTCATAACAACTTTTTTTGTTATGCTCTTTATGGGGGTTCTGTACTACAAGAAGGAAAAGTTACCTCGAGAGAATTCAGAAGAAGAAAATTTCTTGGAGAGTTTAACCGGCATGCCAATCCGTTTCTGCTATACAGATCTTGAAGTTGCAACTAATAACTTCTCTGTGAAGCTTGGTCAAGGAGGTTTTGGATCAGTTTATAAAGGACTTCTACCCGATGGGACTGAATTAGCTGTGAAGAAGCTGGAAGGTATTGGTCAAGGCAAGAAAGAGTTCAGAGCTGAAGTTAGCATCATCGGAAGCATTCATCACCTTAATTTGGTACGGCTAAAAGGATTTTGTGCAGATGGAACTCATAGGCTTCTAGTTTACGAGTACATGGCTAATAACTCATTGGATAAATGGATATTCAAGAAGAAAAAAAGTGAATTTCTTTTGGATTGGGATACAAGGTTTAATATAGCATTAGGAATAGCAAAAGGGCTAGCTTATCTGCATCAAGAATGTGACTCAAAAATTGTTCACTGTGATATCAAGCCTCAAAATGTACTTCTAGATGATCATTTCATTGCCAAAGTTTCGGATTTCGGTTTAGCCAAGCTTATGAATAGAGAAGAAAGCCATGTTTTTACAACATTAAGAGGAACTCGTGGCTACCTTGCACCTGAGTGGATAACAAACTATGCTATATCAGAGAAAAGCGATGTATACAGTTATGGGATGGTGTTGCTAGAGATAATTGGGGGAAGGAAGAATTATGATCCTACTGAGACGTCGGAGAAATTCAATTTCCCTCGTTTTGCTTTTAAGATGATGGAAGAAGGTAAGACGAGAGATATCATTGATTCAGAGTTGAAAATAGATGATGAGAATGATGATAGGGTTGATTGTGCTATAAGTGTTGCATTGTGGTGTATACAGGAAGACATGTCTATGAGACCTTCCATGACAAAAGTTGTTCAAATGTTAGAGGGTCTTTGCACTGTTCCTAAACCACCAAAATCTTCCAATGAAGGAAACACCACCACTTCTTCTGATGCTTACTTATCAGCAGTTAGTCTTTCAGGCCCAAGATAA 2361 0.3825 MGTKHLFLSNVVVGLSISILLTMSKLCLSDTQYIGTISPGMEASQVNFIDEGSKFLVSKNRNFAFGFVTTINDATKFLLVIVHMASSTVLWTANRALPVSNIDNFVFDRKGNAYLQRDGTVIWSTNTISKTMELQDTGNLVLLGNDDNNTVIWQSFSYPTDTLMPSQDFKEGMKLTSEPSSNNLTYVLEIKSGDVILSASFKTPQTYWTMQKDGRKTINKNGNVVAFANLSDNSWRFYDNNRSLLWQFIFSDIYASWIAVLGKDGVITFSNLNGSGSNGDDLLRIPRDPCGTPEPCDPYGICSNNRMCSCPLVLLPSCKPGFASPCDDESKRSVEFLKVDDGLGYFALDFLHPYSNTDLSSCETSCRGNCACLAMFFHRSSGKCFLLDSVGSFQKSDDANSSGYVSYIKVARDGGQRSNKHIIVVVIVVITTFFVMLFMGVLYYKKEKLPRENSEEENFLESLTGMPIRFCYTDLEVATNNFSVKLGQGGFGSVYKGLLPDGTELAVKKLEGIGQGKKEFRAEVSIIGSIHHLNLVRLKGFCADGTHRLLVYEYMANNSLDKWIFKKKKSEFLLDWDTRFNIALGIAKGLAYLHQECDSKIVHCDIKPQNVLLDDHFIAKVSDFGLAKLMNREESHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPTETSEKFNFPRFAFKMMEEGKTRDIIDSELKIDDENDDRVDCAISVALWCIQEDMSMRPSMTKVVQMLEGLCTVPKPPKSSNEGNTTTSSDAYLSAVSLSGPR 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03171 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Mepo6g03171 786 CDD STKc_IRAK 486 754 - -
Mepo6g03171 786 Gene3D Transferase(Phosphotransferase) domain 1 555 775 - -
Mepo6g03171 786 SMART blect_4 47 159 IPR001480 -
Mepo6g03171 786 Pfam Protein kinase domain 484 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03171 786 PIRSF SRK 8 783 IPR024171 GO:0004674
Mepo6g03171 786 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 49 763 - -
Mepo6g03171 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 177 IPR036426 -
Mepo6g03171 786 FunFam S-receptor-like kinase 5 555 760 - -
Mepo6g03171 786 SMART serkin_6 480 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03171 786 MobiDBLite consensus disorder prediction 757 786 - -
Mepo6g03171 786 FunFam serine/threonine-protein kinase PBS1-like 448 554 - -
Mepo6g03171 786 CDD B_lectin 52 159 IPR001480 -
Mepo6g03171 786 Pfam D-mannose binding lectin 88 170 IPR001480 -
Mepo6g03171 786 Gene3D - 45 159 IPR036426 -
Mepo6g03171 786 ProSiteProfiles PAN/Apple domain profile. 326 411 IPR003609 -
Mepo6g03171 786 SUPERFAMILY Protein kinase-like (PK-like) 460 752 IPR011009 -
Mepo6g03171 786 MobiDBLite consensus disorder prediction 761 786 - -
Mepo6g03171 786 ProSiteProfiles Bulb-type lectin domain profile. 40 155 IPR001480 -
Mepo6g03171 786 Gene3D Phosphorylase Kinase; domain 1 444 554 - -
Mepo6g03171 786 ProSiteProfiles Protein kinase domain profile. 480 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03171 786 ProSitePatterns Protein kinases ATP-binding region signature. 486 509 IPR017441 GO:0005524
Mepo6g03171 786 CDD PAN_AP_plant 322 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03171 Mepo-Chr6 43433615 43436082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03171 427 763 Receptor kinase-like Gene Family AT5G20050 45.961 5.69e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo6g03171 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03171 - - tpra:123882999 1107.43