Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03167 ATGGAAAGTACCGATTCATCGACCGGTTCGCAACAACCGAATCTCCCTCCTGGATTCCGATTTCACCCTACAGATGAAGAGCTTGTTGTTCATTACCTCAAGAAAAAAGCAGCTTCAGCTCCTTTACCAGTAGCCATCATAGCTGAAGTTGATCTCTACAAATTTGATCCATGGGAGCTACCAGCTAAGGCAACGTTTGGAGAGCAAGAGTGGTATTTCTTTAGTCCAAGGGACAGGAAGTATCCGAATGGAGCTAGGCCAAACAGGGCTGCAACTTCTGGTTATTGGAAGGCAACTGGTACTGATAAGCCTGTTTTAACTTCTGGTGGGACACAAAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGTGGGAAACCACCAAGAGGTATCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAATAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGCTGTGCCGGATCTACAAGAAAAGCAACACACATAGGTCACCAGTGGAACATGATAGGGAAGATTCAATTGATGATATGATTGGAGGAGTACCACCATCAATCAACGTGGGCCAAATGAGTGCTGCTTCAAGGTTTCATAATTTTTCAAGGTTGTCCTCAAATAGCTACAACAATGCATTGTTGGAAAATGACCAAAATTTATTAGAAGGAATGATGATGAATAACAATAACAATTTAGGAGGTTCAAATTCAAAGGCAGAACTATCTTTTGTACCAACTATGACAACATCTTCAAATGCTCATTCACCTTCCAAAAGAACACTCTCTTCTCTTTATAATTGGAATGATGAAGATGTTGCAGCTCAAGTTGGTACTTCATCATCTAACAAAAGGTTTAGTTTGGAAAATGTTGTGAGGAATGATCAAGAGAATGGAACTGTTGCTACTTCTTTTGCTTCTCTTCTTAATAATATCCCTCAAACATCTTCATTGCATCAACCACAAACAATGTTGGGATCAATACCATATCAAATTCAAGGGATGAATTGGTATGGTTAA 1065 0.3991 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPVEHDREDSIDDMIGGVPPSINVGQMSAASRFHNFSRLSSNSYNNALLENDQNLLEGMMMNNNNNLGGSNSKAELSFVPTMTTSSNAHSPSKRTLSSLYNWNDEDVAAQVGTSSSNKRFSLENVVRNDQENGTVATSFASLLNNIPQTSSLHQPQTMLGSIPYQIQGMNWYG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03167 354 PANTHER NAC TRANSCRIPTION FACTOR 56 15 238 - -
Mepo6g03167 354 FunFam NAC transcription factor 56 24 181 - -
Mepo6g03167 354 MobiDBLite consensus disorder prediction 1 20 - -
Mepo6g03167 354 MobiDBLite consensus disorder prediction 1 17 - -
Mepo6g03167 354 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Mepo6g03167 354 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Mepo6g03167 354 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Mepo6g03167 354 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03167 Mepo-Chr6 43386796 43389062 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03167 1 353 NAC Transcription Factor Family AT3G15510 53.743 9.71e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo6g03167 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03167 - - gmx:100170710 556.599