Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03165 ATGGCAGCATCTTATACTCCAATTTCAGCTATCTCAGGTGGCAAAAAGGATTTAAAGCTCATGGTCCGTGTACCTCATATGTGGTGCATAACTGACAAGGATCGTCCAGATGAGATCATATTTATGAATCTGCTATTGGTTGATGAGAAGGGTGGAAGGATCCAAGCTACAGTTAGGAAATCTTTAGTAGCTATGATCAAAGGAATGGTTGAGGAAGGTTCTACCTATAAGCTTGAGAACATCATGGTGGGTTTTAATGATAGTACCTATAGAATGACAGCACACAAGTATAAGGTTACCATGATGGGTAACTCGAGGTTTACTAAAGTTAGCGCTGCTAATATCTCAAAGAATGTATTTGATTTCATGGCTTTTAAAGATGTGTTAAGTTCTTCACAAGAGGATAAAGTTATCGATATTATCGGACATGTCGTTGAAAAGGATGTCGTGCGAGAGAATGAAAAGAATGGTAAAAAGAGTAAAGTTATGGATCTTACTTTGGAGGATGTAGAGGCAAATAGAATTCATTGTTCATTATGGGGTGATTTTGCCGAAATGATGGATAGGTATTTTGCAACACACGATATGAACTCAAATGTGATACTAATATTGCAGTTTTGCAAAACAAGAAAGTATATGGGTTCGATGGGCGTTGCTAATGCTTTTTTTGGCACAAAAGTAATTCTAAACGGCGACCTTCCTGATGTAACAGCTTACAAAGCTAGCATGAATGGTGGTGAGGTTCAAATGACACAAGGTGTAAGTCAAATGACATCACAAAGTGCAGTTAAAATTGGTGATGAGTTGCTAAATACAAAGCTGATGACTATTGAAGATATGATAGAATCAAATGAGGCATGCCATGGTGTTGTTCTTGCGACCATTTGCGAGATAGAGAATGGTGTTGAGTGGTATTTCCGTTCTTGCACTCAATGTGCGTCTTTGGTTACGGTGAATGATGGTGTGTTGTGTTGCCGCAAGTGCAGTGAATGCAAGAGTGCAGTGCCTAGGTACAAATTGCATGTGATTGTCATGGATTCCACTGGATCAACAACATTCGTGTTGTTTGATCGTATTGTGACACAGTTTATCGGAAGGAATGTTCAAGATTTGATCAATGCATTTAATATGGGTGAAACCAGATTGGATGGAGTTGATCTCACCAATTCTGGTGATGAGATAGCTACTGACAATGGAAAACAGTTAGTGGTGGACGTGGAAGGCGGTGATTCTTGCAGCACAGTTAATTTGGAAGATACACCAGTTAGCAAAGTAGGAGCTAAGCGCTTGACTGACTGTATTGAGTCCCTTGATACTCTTGAACATGATATTGGGCAAGCATCTAACACAAAGCCAGCCAAAATGGTCCGTGTTAAAGTTGAGCCTAAAGAATGA 1395 0.3957 MAASYTPISAISGGKKDLKLMVRVPHMWCITDKDRPDEIIFMNLLLVDEKGGRIQATVRKSLVAMIKGMVEEGSTYKLENIMVGFNDSTYRMTAHKYKVTMMGNSRFTKVSAANISKNVFDFMAFKDVLSSSQEDKVIDIIGHVVEKDVVRENEKNGKKSKVMDLTLEDVEANRIHCSLWGDFAEMMDRYFATHDMNSNVILILQFCKTRKYMGSMGVANAFFGTKVILNGDLPDVTAYKASMNGGEVQMTQGVSQMTSQSAVKIGDELLNTKLMTIEDMIESNEACHGVVLATICEIENGVEWYFRSCTQCASLVTVNDGVLCCRKCSECKSAVPRYKLHVIVMDSTGSTTFVLFDRIVTQFIGRNVQDLINAFNMGETRLDGVDLTNSGDEIATDNGKQLVVDVEGGDSCSTVNLEDTPVSKVGAKRLTDCIESLDTLEHDIGQASNTKPAKMVRVKVEPKE 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03165 464 SUPERFAMILY Nucleic acid-binding proteins 120 249 IPR012340 -
Mepo6g03165 464 PANTHER OS03G0429900 PROTEIN 5 407 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo6g03165 464 SUPERFAMILY Nucleic acid-binding proteins 4 110 IPR012340 -
Mepo6g03165 464 Pfam Replication factor-A C terminal domain 291 374 IPR013955 -
Mepo6g03165 464 Gene3D - 113 252 IPR012340 -
Mepo6g03165 464 SUPERFAMILY Nucleic acid-binding proteins 272 375 IPR012340 -
Mepo6g03165 464 Gene3D - 3 109 IPR012340 -
Mepo6g03165 464 Gene3D - 256 406 IPR012340 -
Mepo6g03165 464 Pfam Domain of unknown function DUF223 44 132 IPR003871 -
Mepo6g03165 464 CDD RPA1_DBD_A_like 19 110 - -
Mepo6g03165 464 CDD RPA1_DBD_B_like 139 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03165 Mepo-Chr6 43361506 43364071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03165 7 371 Core DNA Replication Machinery Family AT5G08020 24.282 2.41e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03165 - - mtr:120577762 491.886