Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03163 ATGGAACAAGATATGGGAGATATTGAATCTCAAACAATTTACAAAGAGACATTGGAGGAAACATCTGAGATCTTGCACAATGGAAAACGTCCCGTAGTTCTTAAGTTTGATGATGTTGTGTACAAAATCAAAGCCAAAAAAGGAGGATTATTTAAGAAGAACATAGAAGTAGAAGAGAAAACAATACTAAAAGGAGTAACAGGAATTGTCCAACCAGGTGAAATGCTAGCAATGTTAGGTCCATCAGGGAGTGGCAAAACAACATTATTAACAGCATTAGGAGGAAGACTTGGTGGAAAACTTTATGGATCCATAACATACAATGAAAAACCTTTTTCAAATGTTATAAAAAGAAACACAGGTTTTGTCACACAAGATGATGTTCTTTACCCTCACTTAACGGTAACCGAAACACTTGTTTTCACAGCACTACTTAGATTACCAAATAGTGTTACAAAAGAAGAGAAAGTTACTCATGCAAAGAATGTGATAGATCAACTTGGTTTAACAAAATGCAAAGATAGCATTGTTGGAAGTGCATTCCTAAGAGGTGTTTCTGGTGGAGAAAGAAAAAGGGTTAGTATTGGACAAGAATTGCTTATAAATCCTAGTTTGTTGTTTCTTGATGAACCAACATCTGGTTTAGATTCTACTACAGCACAAAGAATTGTGTCAACTTTGTGGGATTTGGCAAGAGGAGGAAGGACTGTTGTCATGACAATACATCAACCTTCTAGTAGATTATATTATATGTTTCATAAAGTTTTGTTGCTTGCTGAAGGGAATGTTTTGTATTTTGGAAAAGGTTCTGAAGCTATTGAACATTTTTCTAATATTGGTTATGCTCCTGCTATGGCTATGAATCCTTCAGATTTCCTTTTGGATCTTGCAAATGGTATCTACACTGATGACACTAATCATGACCATACAATAGACAAACAAAAATTGATTTCAGCATTTAAGAGCAAATATGATGCACAGTCCAAGCCAGAACATCAAGAAATCAATGACTCTGATACAAATCAGGGTAGATTTCAAGAGACAGGTTCTGGAAAATGGCCAACAAGCTGGTCAGAGCAATTCTTTGTACTGTTAAGAAGGGATGTCAAAGAGAGAAAATATGAATCATTCTCTGGCTTGAGGATTGCTCAGGTCCTTGTGGTTGCACTTATGTCAGGACTACTTTGGTATAAATCTGATATGTCACACTTGCAGGATCAGATTGGACTACTATTCTTTGTAACAGGCTTTTGGGGATTTTTCCCACTCTTTCAAGCAATCTTCACCTTCCCTCAAGAACTAATGATGCTGGAAAAAGAAAGATCCTCAGGAATGTACAGACTCTCCTCATATTTCATTTCAAGAATGGTAGCTGACCTACCAATGGAACTAGTCCTCCCTACAATTTTCCTTCTCATAACATATTTCATGGCAGGACTCAAAGCAACTGTGATAAATTTCTTTCAAACACTTTTCAGCCTTTTACTCAATGTGTTAGTGTCACAAGGACTAGGGCTTGCACTTGGTGCTGTTGTGCTTGATCAAAAATCAGCAACAACACTTGCATCAGTGATCATGCTATGTTTCTTACTTGCTGGTGGATTTTATGTTCAGAATGTTCCAAAATTTATAGCATGGGTGAAGTATGTTTCTGTTAGCTACTATACATATCAGCTATTTATTGGGTCACAGTATCACAGTGGTGATACATACCCTTGTTCTAGTGGACAATGTCCTATTGAGGAGTTTCCTCCTATAAAACAAATGGGGATTGATTTGAATGGTCTAGGATTGGCTGCATTGGCTCTTGTTATAATGCTAATTGGTTATAGACTTATAGCTTATTGTGCTCTTATGAGGATTGGAGTCACAAAGAAATTGGCTTAG 1887 0.3672 MEQDMGDIESQTIYKETLEETSEILHNGKRPVVLKFDDVVYKIKAKKGGLFKKNIEVEEKTILKGVTGIVQPGEMLAMLGPSGSGKTTLLTALGGRLGGKLYGSITYNEKPFSNVIKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSVTKEEKVTHAKNVIDQLGLTKCKDSIVGSAFLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWDLARGGRTVVMTIHQPSSRLYYMFHKVLLLAEGNVLYFGKGSEAIEHFSNIGYAPAMAMNPSDFLLDLANGIYTDDTNHDHTIDKQKLISAFKSKYDAQSKPEHQEINDSDTNQGRFQETGSGKWPTSWSEQFFVLLRRDVKERKYESFSGLRIAQVLVVALMSGLLWYKSDMSHLQDQIGLLFFVTGFWGFFPLFQAIFTFPQELMMLEKERSSGMYRLSSYFISRMVADLPMELVLPTIFLLITYFMAGLKATVINFFQTLFSLLLNVLVSQGLGLALGAVVLDQKSATTLASVIMLCFLLAGGFYVQNVPKFIAWVKYVSVSYYTYQLFIGSQYHSGDTYPCSSGQCPIEEFPPIKQMGIDLNGLGLAALALVIMLIGYRLIAYCALMRIGVTKKLA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03163 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 285 IPR003439 GO:0005524
Mepo6g03163 628 SMART AAA_5 72 270 IPR003593 GO:0016887
Mepo6g03163 628 Pfam ABC-2 type transporter 242 344 IPR043926 GO:0140359
Mepo6g03163 628 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 614 - -
Mepo6g03163 628 FunFam ABC transporter G family member 22 50 279 - -
Mepo6g03163 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 279 IPR027417 -
Mepo6g03163 628 Pfam ABC transporter 63 213 IPR003439 GO:0005524
Mepo6g03163 628 Pfam ABC-2 type transporter 359 565 IPR013525 GO:0016020|GO:0140359
Mepo6g03163 628 CDD ABCG_EPDR 31 267 - -
Mepo6g03163 628 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524|GO:0016887
Mepo6g03163 628 MobiDBLite consensus disorder prediction 329 352 - -
Mepo6g03163 628 Gene3D - 51 280 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03163 Mepo-Chr6 43319779 43324828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03163 70 353 Calmodulin-binding Proteins AT2G36910 24.606 2.36e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03163 K05681 - gmx:100816135 937.176