Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03126 ATGGCTGAGTTGACAGAAGTTTTTCCCACAGGCAAACAATTTGATGGTTTAATGCACATGTATGTTAATGTCATAACATTTGATCTTCCAACATTTGTTATGATATGTCTTATAATCACAATGTTTTTCTTCATATTCCATCAAATTTTTCACGGTTTATTCTATTGGTTTATGGAAATGAGACCTATTATTATCAATGAACATGACATTGAACAAGGAACTCATATAGCTTATGACGACGACGATGATGATCATAATGATGTATCTCACCAAGGGGTTACAATTTTCCATGCTCTTGTGTTTAGCAATTTGCAAGATTGGACAATGGTGGCTACAAGTGAAGAAGAACAAGAAGAAAATTATGATAAGAATAGAGGACAAAAACTTAGAGATTCTATGAAATTGCCACCTTTGATGAACTATGATGGAATTGGAAAGCATGGTCATGAGTTAAGAAGAAGTTGCAATGAATGTGCCATTTGTTTGGAAGATTTTCAAAGGGGACAATTGTGTCAAGTTTTTCCAGTTTGCAAGCACATTTTTCATTCGGATTGTATAGATCATTGGTTGCAGAGGAAATTAACATGTCCTATATGTCGTAATTGTTTATGA 612 0.3366 MAELTEVFPTGKQFDGLMHMYVNVITFDLPTFVMICLIITMFFFIFHQIFHGLFYWFMEMRPIIINEHDIEQGTHIAYDDDDDDHNDVSHQGVTIFHALVFSNLQDWTMVATSEEEQEENYDKNRGQKLRDSMKLPPLMNYDGIGKHGHELRRSCNECAICLEDFQRGQLCQVFPVCKHIFHSDCIDHWLQRKLTCPICRNCL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03126 203 Pfam Ring finger domain 156 200 IPR001841 -
Mepo6g03126 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 203 IPR013083 -
Mepo6g03126 203 CDD RING-H2_PA-TM-RING 157 200 - -
Mepo6g03126 203 PANTHER RING FINGER DOMAIN-CONTAINING 34 201 - -
Mepo6g03126 203 SMART ring_2 158 199 IPR001841 -
Mepo6g03126 203 ProSiteProfiles Zinc finger RING-type profile. 158 200 IPR001841 -
Mepo6g03126 203 SUPERFAMILY RING/U-box 103 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03126 Mepo-Chr6 42940632 42941243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03126 26 201 C3H Transcription Factor Family AT1G53010 25.281 1.19e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03126 - - psat:127082020 314.309