Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03107 ATGGGTTGCATGTGTTGCAAGCCTTCTGCAATCGAGGATAGTAAGGATAGTCCGAGGGAGCGTTTATCGAACAAGCCTGTGTTGGATTCACGTGTGTCTAGAGGAGCTTCGTCGAGGAGGGAGGAAGCGTATAGGGTGAAGGATAGAAATGATAATAACAATGATGCTAGAACGGCGTTGATTGACAAGCATGGGCAAGGGAATGGTTCTGTTAGAGTTCATGGTGATAATTTTGAAAGAAAGAGGGAGAAAATGGAATATGTTATTGCTCCACATCCGGGGATTGGTAGTGTTCCTAAGGCTATGGAAGGGGAACATGTTGCGGCTGGATGGCCGTCATGGCTGGCAGCAGTTGCTGGCGATGCAATCAAGGGATGGCTGCCACGGCGCGCAGATTCTTTTGAGAAGTTGGATAAAATTGGCCAGGGAACTTATAGTAATGTTTATAGAGCTCGTGATCTTGAGCAAAAAAAGATTGTTGCTTTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGCTTCATGGCAAGGGAAATTCACATTCTACGTCGGCTTGATCATCCAAATGTCATAAAACTGGAGGGCTTGGTCACATCAAGGATGTCGTGCAGCTTATACCTTGTTTTTGAATACATGGAGCATGACTTGGCCGGGCTTGCATCACATCCTGGACTGAAGTTTACAGAATCACAGGTTAAATGTTATATGCAGCAACTTCTACGTGGACTTGATCACTGCCACAGCCGTGGTGTGCTGCACCGTGATATTAAGGGTTCCAATCTTTTGATTGACAACAATGGAGTATTGAAAATTGCAGACTTTGGTTTGGCGAGCTTTTTTGATCCCAATCTAAATCAGCCACTGACAAGCCGAGTTGTCACTCTTTGGTATAGGCCACCTGAACTTTTACTCGGAGCTACTTACTATGGTACTGCAGTAGATTTATGGAGTACAGGTTGCATACTTGCTGAGCTGTATGCTGGCAAGCCTATTATGCCTGGTAGAACTGAGGTGGAGCAATTGCATAAAATTTTTAAACTTTGTGGTTCGCCTTCCGAGGACTACTGGAGAAAATCAAAATTGCCTCATGCAACGATATTTAAGCCTCAGCAACCCTATAGGCGCTGTGTTGCTGAAACATTCAAGGAATTTCCTGCACCTGCAATAGAATTAATAGAGACACTTTTGTCCATAGACCCTGCTGATCGTGGAACTTCATCATCCGCTTTGATCAGTGAGTTCTTCTCAACAAAGCCTCTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCAAGCAAAGAATTTGATGCCAAAGTACGGGATGAAGAAGCTAGAAGACAAGGGGCAGCAGGAAGCAAGGGTCAAAGACATGATCCTGAGAGAAGAGGAGTACGGGAATCTCGAGCTGTTCCTGCACCTGATGCCAATGCTGAACTGGTGGTGTCAATGCAGAAGAGACAAGGTCAGAACTATTCTCAAAGTAGGAGTGAGAAGTTTAACCCTCATCCTGAAGACGCTGGTTCTGGTTTTCCCATTGAACCCCCTAGACCATCACAAGCTGCAGAAGCAAACGTGGATCCCCAGGCAAATCAACATAAAAGAGCCTCTCATTCGGGTCCACTTACTCACCGTGCTGCATGGGCGAAAGCTGGGAAGAATCAGGATGACGCTCCAAAGATTTCAGTGGGCGGCGACTTATCTACAATGTCAGGCTTAGTTGCAGCCAGGAGGAGTATGCTGTCTGACGATCGCAGAGAAAGTTCTGGTTCATCACAAGTCGAGGCTCCGAAACTAATTACCAGGTTCCCAGGATCCTTCAAGGAGGCATCTGAATCATTGATGCAACAAAATCAAAATCAGAAGCATCATGTACATGCTTCTCAAAAGGAAGATGCAAAAGGCAGCAACAAAGACCCAAATAATGCTGGTTATGGATCTAAGGGTTATAAAATTCATTATTCCGGTCCATTGCTCGTTCCATCAAGCAACATGGATCAGATGTTGAAAGACCACGACCGCCAAATTCAAGAAGCGGTCAGAAGAGCACGTCTAGACAAGGCAAAAATGCGAAGACTCCAAGCTGAAGGGAACCAGATAAACAATTCATTATTTGTTTCTGGTCGTTGA 2139 0.4511 MGCMCCKPSAIEDSKDSPRERLSNKPVLDSRVSRGASSRREEAYRVKDRNDNNNDARTALIDKHGQGNGSVRVHGDNFERKREKMEYVIAPHPGIGSVPKAMEGEHVAAGWPSWLAAVAGDAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTESQVKCYMQQLLRGLDHCHSRGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDPNLNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFKEFPAPAIELIETLLSIDPADRGTSSSALISEFFSTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQGAAGSKGQRHDPERRGVRESRAVPAPDANAELVVSMQKRQGQNYSQSRSEKFNPHPEDAGSGFPIEPPRPSQAAEANVDPQANQHKRASHSGPLTHRAAWAKAGKNQDDAPKISVGGDLSTMSGLVAARRSMLSDDRRESSGSSQVEAPKLITRFPGSFKEASESLMQQNQNQKHHVHASQKEDAKGSNKDPNNAGYGSKGYKIHYSGPLLVPSSNMDQMLKDHDRQIQEAVRRARLDKAKMRRLQAEGNQINNSLFVSGR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03107 712 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Mepo6g03107 712 CDD STKc_CDK9_like 134 418 - -
Mepo6g03107 712 SUPERFAMILY Protein kinase-like (PK-like) 128 426 IPR011009 -
Mepo6g03107 712 FunFam probable serine/threonine-protein kinase At1g54610 217 458 - -
Mepo6g03107 712 Pfam Protein kinase domain 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03107 712 PANTHER CELL DIVISION PROTEIN KINASE 132 424 - -
Mepo6g03107 712 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03107 712 MobiDBLite consensus disorder prediction 425 569 - -
Mepo6g03107 712 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03107 712 MobiDBLite consensus disorder prediction 34 56 - -
Mepo6g03107 712 MobiDBLite consensus disorder prediction 437 472 - -
Mepo6g03107 712 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Mepo6g03107 712 MobiDBLite consensus disorder prediction 581 651 - -
Mepo6g03107 712 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Mepo6g03107 712 MobiDBLite consensus disorder prediction 486 501 - -
Mepo6g03107 712 MobiDBLite consensus disorder prediction 7 56 - -
Mepo6g03107 712 MobiDBLite consensus disorder prediction 12 27 - -
Mepo6g03107 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Mepo6g03107 712 Coils Coil 679 699 - -
Mepo6g03107 712 Gene3D Transferase(Phosphotransferase) domain 1 217 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03107 Mepo-Chr6 42768568 42774031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03107 126 463 Core Cell Cycle Gene Families AT5G10270 52.542 2.27e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo6g03107 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03107 - - gmx:100792173 1265.75