Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03077 ATGGTCCATGTTCTACTTTCTTTTCTGTTTAGAGGGGTATCCTATCTCTTTCTTCAAGGAATGGTGTTACTCAGATGTTTCTGGTTGTCACTGTTTCAATGTTGTGTCTTGTCTTGCTTTTTTGGTTTGTCTTTGAGTCTTGACAATGGAACAAAGTCATGTGATCCTAGTGATTTATCAGCTCTGAAGGAGTTTGCAGGCAACCTTACAAATGGTTTAATTATCAAATCATGGTCCAATGATAGTGTTTGTTGCAATTGGATTGGAGTTGTGTGTGGTGATAATAATGGAGAAGCCGTTTCTAGAGTGACCAAGTTGATTCTTCCTGAAATGAGTCTCAATGGAACTATTTCACATTCTTTAGGGAAACTAGATCAACTCACTGTGCTAAATCTTTCATTCAATCATCTTCAGGGTGGATTGCCTTTGGAATTGTCTAAGTTGAAGATGTTGAAGTTTCTTGATTTGAGCTATAACAAGTTGTCAGGAGGTGTGAATGAATCACTTTCTGGTTTGAAGTCCATTGAAGTGTTGAATATTTCAAGCAATTCATTTTCTGATAAAGTTTTCCACCTTGGTGAATTTCCACATCTACTTGCTCTCAATGTGAGTAACAATTCATTCTCTGGTGGATTCAGTTCTCAAATTTGCAATTCTTCAAAGGATCTTCACACACTTGATTTATCTTTAAATCATTTTAGTGGTGATCTTGAAGGTTTGAACAACTGCATTGTTTCTCTCCAAAGGTTACATTTAGATTCCAATTCATTTTCTGGTCCTTTTCCTGAGTCATTGTATTCCATGTTATCATTGGAGAGATTATCACTCTCTGCCAACAATTTTTCTGGCAAGTTAAGCAAGGAGTTAAGTAAGCTTACTAGCCTAAAATCTCTTGTGGTTTCTGCAAACCATTTTTCAGGCGAAATCCCGAATGTATTTGGGAACATTTTGCAGCTAGAACAATTTGTAGCACATGCTAATTCATTTTCTGGACCATTACCTTCCACTTTGGCTTTATGCTCTAAGCTTAAAGTGCTTGATCTTAAAAACAATTCATTGTCAGGTCCAATTGATCTTAATTTCACTGGTTTGTCAAATCTTTGTTCACTTGATCTTGCTAGTAATCATTTTACTGGACCACTTCCTAGTTCATTGTCCTATTGTCATGAATTGAAAGTTTTAAGCCTTGCTAGGAATGGTTTAAATGGTTCTATACCTGAAAGCTATGCCAAATTATCTTCCCTTTTGTTTGTATCTTTTTCAAACAACAGCTTAGATAATTTATCTGGTGCACTTACTGTGCTTCAGAAGTGCAAAAACCTCACAACTCTTATCCTCACTAAGAATTTCCACGGTGAAGAAATTCCACAAAATGTACCTGGAGGATTTGAGAGTCTTATGGTGTTGGCACTCGGAAACTGCGGTCTGAAGAGTCATATTCCTTCTTGGCTGTTAAAATGCAAGAAATTGGCTGTACTTGATTTGTCTTGGAACTCTTTGAATGGCAGTATCCCTTTGTGGATCGGTCAAATGGACAAATTGTTCTATTTGGATTTCTCAAACAATTCTCTCTCAGGTGAAATACCGAAAAGTTTGACAGAGTTGAAGGGACTTGTATGCCCGAATTGTGGAAGACCAAATTTTGCTTCTTATGCTTTCATTCCACTCTTTGTTAAGAGAAATACTAGTGCTAGTGGTTTGCAATATAATCAAGCTTCAAGTTTCCCTCCTTCAATTTTGTTGAGCAATAACATAATAAATGGAAGTATATGGCCTGAAATTGGCAGCCTGAAGGCACTGCATGTGTTGGATTTCAGCAGGAACAACATCAGTGGTACAATTCCTAGCACTATTTCAGAGATGGAGAATTTGGAAACATTAGATTTATCTTATAATGATCTATCTGGTACAATTCCTCCTTCATTTAACAACCTCACATTCTTGTCGAAGTTCAGTGTGGCGTATAATCGCTTGCGAGGACCGATTCCAAGTGGGGGGCAGTTTTTAAGCTTCTCTAATTCAAGCTTTGAGGGCAATTTGGGACTCTGCAGGGATTTTGATATTGATAATACTCCTTGCAATATGAGGCCAAATTTGTCTTCTGGTTCATCCAGAAAATTTAGTAGAAGCAATGTTCTTGGCATAACAATCAGCATAGGGATAGCGCTTGCTTTGTTGCTTGCAATTATTGTGCTAAGAATGTCAAAGAGGGATGAAGATAAGCCAATTGATAGCTTTGATGAGGATATGAGTGGGAGGCCACGCAGGTTATCATCTGAAGGGTTTGTTGCTTCAAAATTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTCACAGTTTCGGATTTGTTAAAAGCAACAAGCAATTTCAACCAGGCGAATATTGTCGGTTGTGGTGGCTTCGGTCTTGTTTACAAGGCGTATCTTCCGAACGGCATGAAAGCGGCTGTCAAGAGGCTTTCTGGCGACTGCGGTCAGATGGAACGTGAATTTCAAGCCGAAGTCGAAGCCCTCTCAAGAGCTCAACACAAGAACCTTGTTTCTCTTAAAGGCTATTGTCGGCATGGCAACGACCGATTACTAATTTATTCGTACATGGAGAACGGTAGCTTGGATTATTGGCTTCACGAGTGTGTGGATGGAAATTCAGCTCTGAAATGGGATGTACGACTCAAGATTGCACAAGGTGCGGCTCGTGGATTAGCCTACTTACATAAGGATTGCGAACCGTACATTGTGCACCGCGATATCAAATCTAGCAACATACTTTTGAATGATAAGTTTGAAGCTCATTTGGCTGATTTTGGTCTCTCAAGACTACTTTCACCATACGATACTCATGTCACAACAGACTTGGTAGGAACTTTAGGGTATATTCCTCCAGAATATAGTCAGACACTGACAGCAACATTCCGCGGCGATGTCTATAGTTTCGGAGTTGTTCTTCTCGAGCTTCTTACAGGTAGAAGGCCCGTTGAAGTCATCAAGGGGAAAAATTGCAGGAATCTTGTATCTTGGGTTTATCAGATGAAATATGAAAATAAGGAGCAGGAAATTTTTGATCAAGCCATTTGGGAAAAGGAAAGGGAGAAACAACTATTGGAAGTACTTTCCGTTGCTTGTAAATGTCTTGATCAAGATCCAAGGCAAAGACCTTCTATTGAAATGGTTGTTTCATGGCTTGATAGTGTAAGAGTTGATGGCTTTCAACAATGA 3216 0.3893 MVHVLLSFLFRGVSYLFLQGMVLLRCFWLSLFQCCVLSCFFGLSLSLDNGTKSCDPSDLSALKEFAGNLTNGLIIKSWSNDSVCCNWIGVVCGDNNGEAVSRVTKLILPEMSLNGTISHSLGKLDQLTVLNLSFNHLQGGLPLELSKLKMLKFLDLSYNKLSGGVNESLSGLKSIEVLNISSNSFSDKVFHLGEFPHLLALNVSNNSFSGGFSSQICNSSKDLHTLDLSLNHFSGDLEGLNNCIVSLQRLHLDSNSFSGPFPESLYSMLSLERLSLSANNFSGKLSKELSKLTSLKSLVVSANHFSGEIPNVFGNILQLEQFVAHANSFSGPLPSTLALCSKLKVLDLKNNSLSGPIDLNFTGLSNLCSLDLASNHFTGPLPSSLSYCHELKVLSLARNGLNGSIPESYAKLSSLLFVSFSNNSLDNLSGALTVLQKCKNLTTLILTKNFHGEEIPQNVPGGFESLMVLALGNCGLKSHIPSWLLKCKKLAVLDLSWNSLNGSIPLWIGQMDKLFYLDFSNNSLSGEIPKSLTELKGLVCPNCGRPNFASYAFIPLFVKRNTSASGLQYNQASSFPPSILLSNNIINGSIWPEIGSLKALHVLDFSRNNISGTIPSTISEMENLETLDLSYNDLSGTIPPSFNNLTFLSKFSVAYNRLRGPIPSGGQFLSFSNSSFEGNLGLCRDFDIDNTPCNMRPNLSSGSSRKFSRSNVLGITISIGIALALLLAIIVLRMSKRDEDKPIDSFDEDMSGRPRRLSSEGFVASKLVLFQNSDCKDLTVSDLLKATSNFNQANIVGCGGFGLVYKAYLPNGMKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYMENGSLDYWLHECVDGNSALKWDVRLKIAQGAARGLAYLHKDCEPYIVHRDIKSSNILLNDKFEAHLADFGLSRLLSPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVYQMKYENKEQEIFDQAIWEKEREKQLLEVLSVACKCLDQDPRQRPSIEMVVSWLDSVRVDGFQQ 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03077 1071 FunFam Phytosulfokine receptor 1 754 865 - -
Mepo6g03077 1071 Pfam Leucine rich repeat 599 658 IPR001611 GO:0005515
Mepo6g03077 1071 Pfam Leucine rich repeat 342 401 IPR001611 GO:0005515
Mepo6g03077 1071 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Mepo6g03077 1071 Pfam Protein kinase domain 791 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03077 1071 ProSiteProfiles Leucine-rich repeat profile. 623 645 IPR001611 GO:0005515
Mepo6g03077 1071 FunFam Tyrosine-sulfated glycopeptide receptor 1 361 697 - -
Mepo6g03077 1071 Gene3D Ribonuclease Inhibitor 429 697 IPR032675 -
Mepo6g03077 1071 Gene3D Phosphorylase Kinase; domain 1 755 865 - -
Mepo6g03077 1071 FunFam Leucine-rich repeat receptor-like kinase 57 168 - -
Mepo6g03077 1071 Gene3D Transferase(Phosphotransferase) domain 1 866 1068 - -
Mepo6g03077 1071 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 262 357 - -
Mepo6g03077 1071 SMART LRR_typ_2 124 147 IPR003591 -
Mepo6g03077 1071 SMART LRR_typ_2 412 434 IPR003591 -
Mepo6g03077 1071 SMART LRR_typ_2 292 315 IPR003591 -
Mepo6g03077 1071 SMART LRR_typ_2 148 171 IPR003591 -
Mepo6g03077 1071 SMART LRR_typ_2 364 388 IPR003591 -
Mepo6g03077 1071 SMART LRR_typ_2 621 644 IPR003591 -
Mepo6g03077 1071 SUPERFAMILY L domain-like 567 683 - -
Mepo6g03077 1071 SUPERFAMILY L domain-like 54 330 - -
Mepo6g03077 1071 Pfam Leucine rich repeat N-terminal domain 56 92 IPR013210 -
Mepo6g03077 1071 ProSitePatterns Protein kinases ATP-binding region signature. 796 818 IPR017441 GO:0005524
Mepo6g03077 1071 Gene3D Ribonuclease Inhibitor 57 175 IPR032675 -
Mepo6g03077 1071 SMART serkin_6 790 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03077 1071 SUPERFAMILY Protein kinase-like (PK-like) 772 1061 IPR011009 -
Mepo6g03077 1071 PANTHER LEUCINE RICH REPEAT KINASE 2 75 190 - -
Mepo6g03077 1071 ProSiteProfiles Protein kinase domain profile. 790 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03077 1071 ProSitePatterns Serine/Threonine protein kinases active-site signature. 912 924 IPR008271 GO:0004672|GO:0006468
Mepo6g03077 1071 SUPERFAMILY RNI-like 245 538 - -
Mepo6g03077 1071 Gene3D Ribonuclease Inhibitor 189 428 IPR032675 -
Mepo6g03077 1071 FunFam Leucine-rich repeat receptor-like protein kinase 866 1070 - -
Mepo6g03077 1071 PRINTS Leucine-rich repeat signature 621 634 - -
Mepo6g03077 1071 PRINTS Leucine-rich repeat signature 151 164 - -
Mepo6g03077 1071 CDD STKc_IRAK 796 1062 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03077 Mepo-Chr6 42442423 42446725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03077 74 1067 Receptor kinase-like Gene Family AT1G55610 33.273 9.26e-159 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mepo6g03077 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03077 - - mtr:25487312 1984.92