Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03073 ATGGAAGCAAGGAGTACAATGGAAGGGAAGCAAACATCAGTTGAGAAGGTTTGGAAAGACATCATATTTGAAGAAATAGAAGTTGAAGAAGAGGAAGAAGGTGGTGTTGAAGATGATGAGAAGAAGAAAGGTGTTTGTGTGAGTGGGAGAAAAGAGCCAAGTAGAGGTGGAAGATTTTCTCCACCTTATTGTCAAGTAGAAAGTTGTGGAGCTGATTTAACTCTTGCAAAGGGATATCATCGTCGCCATAAGGTTTGTGAGGTTCATTCCAAAGCATCTGTTGTGGTGGTTGCAGGGATGAGGCAGAGGTTTTGCCAACAATGTAGCAGGTTCCATGAGCTTGCAGAGTTTGATGAATCGAAAAGAAGCTGTCGAAGACGCTTAGCGCGACACAATGAACGGCGTCGTAAAAGCACTGCTGGAACTTGCACTGAAGGAAGCAGTACTGGCCAGAAAAACAATGATGGTGATTGGAGACAAATTCATAGGAACATAACAAGTAGTTTTGGTCACGATTTTCTGAATTTTAGATGA 534 0.4232 MEARSTMEGKQTSVEKVWKDIIFEEIEVEEEEEGGVEDDEKKKGVCVSGRKEPSRGGRFSPPYCQVESCGADLTLAKGYHRRHKVCEVHSKASVVVVAGMRQRFCQQCSRFHELAEFDESKRSCRRRLARHNERRRKSTAGTCTEGSSTGQKNNDGDWRQIHRNITSSFGHDFLNFR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03073 177 Gene3D - 55 125 IPR036893 GO:0003677|GO:0005634
Mepo6g03073 177 MobiDBLite consensus disorder prediction 141 158 - -
Mepo6g03073 177 MobiDBLite consensus disorder prediction 29 54 - -
Mepo6g03073 177 MobiDBLite consensus disorder prediction 129 158 - -
Mepo6g03073 177 Pfam SBP domain 64 137 IPR004333 GO:0003677
Mepo6g03073 177 ProSiteProfiles Zinc finger SBP-type profile. 61 138 IPR004333 GO:0003677
Mepo6g03073 177 FunFam Squamosa promoter-binding-like protein 14 56 125 - -
Mepo6g03073 177 SUPERFAMILY SBT domain 62 141 IPR036893 GO:0003677|GO:0005634
Mepo6g03073 177 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 47 140 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03073 Mepo-Chr6 42420266 42423186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03073 50 156 SBP-box Gene Family AT1G53160 62.617 1.15e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mepo6g03073 SBP 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03073 - - gmx:100815775 180.259