Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03066 ATGGAAAGCTTCTTCCACCACCACCACCACATGAACAACAACAGTAATAACAACAGTGATGCACATTTACCACCTGGCTTTCGTTTCCACCCAACAGATGAAGAACTCATCACATTCTACCTTCTCAAAAAAGTTCTTGACACCACTTTCACTGCAAGAGCCATAGCTGAAGTTGATCTCAACAAGTGTGAACCATGGGAGCTACCTGAGAAAGCTAAGATGGGTGAGAAAGAATGGTACTTCTTCAGTCTACGTGACAGAAAGTATCCAACTGGTTTGCGTACAAATAGAGCAACAGAAGCTGGTTATTGGAAAGCAACTGGGAAAGATAGAGAGATTTATAGCTCAAAAACTTACTCTCTTGTTGGAATGAAGAAAACCCTTGTTTTCTATAGAGGTAGAGCTCCTAAAGGTGAAAAAAGTAACTGGGTTATGCATGAATACCGTCTTGAAGGAAAATTTGCTTACCATTTCCTCTCTAGAAACTCCAAGGATGAATGGGTCATTTCACGTGTGTTTCAAAAGAGTAATACTGGAAATGGAAGCACCACCGTGACAGCCGCCACCACAAGTGGTGCAAAAAAGACCAAAATAGCCTCAAACTCAGCCAGCAACAACAGCATGAGTCTTTGTCCTGAACCAAGTTCACCTTCTTCAGTTTACCTTCCACCTCTTCTTGATTCATCTCCTTACACCGCCGCTAGCACCGCCGCATTCAACGGTGGTCAAATGTGTAACTACAACAGCTCCAGCAACAACACTGATCTAAAGGAGCACGTGTCCTGTTTCTCCACAACATCTACAACATCAAATGTTGTCCCTGTTCACAACAACTTTAGCAACAATAGCAATGGAAGCTTTGATCTTGTTTCCCCTTCTATGAATGCAACAATGGATCCTTTTGCAAGGTTTCAGAGGAATGTCGGTGTTTCTGCCTTTCCTAGCTTGAGGTCACTGCAAGATAATCTTCAGCTTCCTTTCTTTTTCTCCTCGGCGGCTGCGGCGCAGCCTTTTCCCGGTGGTGGTGGTGATATTCTTGGTGGCTGGGGGATGCCGGCGGAGGAGCAAAGGGTGGTGGTTGACAGTGGTGGTGGTCTTAACATGGGAGGATTAGGTTCTTCTGAGCTTGACTGCTTGTGGAACTATTAA 1149 0.4456 MESFFHHHHHMNNNSNNNSDAHLPPGFRFHPTDEELITFYLLKKVLDTTFTARAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTYSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHFLSRNSKDEWVISRVFQKSNTGNGSTTVTAATTSGAKKTKIASNSASNNSMSLCPEPSSPSSVYLPPLLDSSPYTAASTAAFNGGQMCNYNSSSNNTDLKEHVSCFSTTSTTSNVVPVHNNFSNNSNGSFDLVSPSMNATMDPFARFQRNVGVSAFPSLRSLQDNLQLPFFFSSAAAAQPFPGGGGDILGGWGMPAEEQRVVVDSGGGLNMGGLGSSELDCLWNY 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03066 382 FunFam NAC domain-containing protein 100-like 32 179 - -
Mepo6g03066 382 Gene3D NAC domain 32 179 IPR036093 GO:0003677|GO:0006355
Mepo6g03066 382 SUPERFAMILY NAC domain 9 175 IPR036093 GO:0003677|GO:0006355
Mepo6g03066 382 ProSiteProfiles NAC domain profile. 23 175 IPR003441 GO:0003677|GO:0006355
Mepo6g03066 382 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 251 - -
Mepo6g03066 382 Pfam No apical meristem (NAM) protein 24 150 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03066 Mepo-Chr6 42305988 42307889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03066 1 382 NAC Transcription Factor Family AT5G53950 52.567 7.65e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo6g03066 NAM 3.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03066 - - vun:114185732 434.106