Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03050 ATGATTTCAGAAGAAGCACTGCTGGTTCTCATGGATGATGGTAGAGGTCCACACACAAGGACTAGAGGAAATCACCAATCTTCTAGTACTTTGGCTAGTTCTTATATTGCTCACTCTAATGCAAGACACATTGGTGAGGTTGCTATGAGGGATAACACCTCACTGCCATTTTGTTTCCCTTCACTAAATCAAGTAGGACAAGATAACAATATAGGGAGTAGGTTAGGTCAATCTATTATGGGGAACAACCATAACCATTTGATTAATGCAAACAATATAAGGCAATCCTTTCTACCAATACCTTATATACAAGCTTCAAATGCTAATGGAAGTTCGTTGCAAAGGTATTACCATGACACAATTGGCAATCGAAATGACACTTTATATTCTAGTCCTCCTCGTCCCACCCTACAACACAATAATTACCAGTACCCTCCAACACTTGCTACTAATGAAGTTCCACCAAATCCTCTACGCGGTGTCGTGATCCCTCCACAGACGGGCCTTCAGATTTTACAACCACATGGAGAGATACCCGAGATAACTCTCAGAAATCGAAGAGTTAACCCTTCCAGCTTCATCTTTATTGATGAAGAATTTAAGATTCAAGAGAAGATTGGAATTCTTCAATGCAAGCATGAATATCATGTTGACTGCATAATAAAATGGTTGATGGTAAAAAATATTTGCCCTATTTGCAAAGTAGAAGCTTTAACTGATGGAGAGAAGAATAAATCGCTTGGAATCTATGATTTCTTCATGCATGCATATCATTTTATTCGTGCCTGTTTCCTTCTTGAATAA 804 0.3843 MISEEALLVLMDDGRGPHTRTRGNHQSSSTLASSYIAHSNARHIGEVAMRDNTSLPFCFPSLNQVGQDNNIGSRLGQSIMGNNHNHLINANNIRQSFLPIPYIQASNANGSSLQRYYHDTIGNRNDTLYSSPPRPTLQHNNYQYPPTLATNEVPPNPLRGVVIPPQTGLQILQPHGEIPEITLRNRRVNPSSFIFIDEEFKIQEKIGILQCKHEYHVDCIIKWLMVKNICPICKVEALTDGEKNKSLGIYDFFMHAYHFIRACFLLE 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03050 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 249 IPR013083 -
Mepo6g03050 267 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 198 238 IPR045191 GO:0061630
Mepo6g03050 267 CDD RING-H2_RNF24-like 198 234 - -
Mepo6g03050 267 SUPERFAMILY RING/U-box 198 239 - -
Mepo6g03050 267 Pfam RING-H2 zinc finger domain 209 234 IPR024766 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03050 Mepo-Chr6 42115923 42117362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03050 198 238 C3H Transcription Factor Family AT2G15530 56.098 8.31e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03050 - K19041 vvi:100251458 98.5969