Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03047 ATGGCACAGTTACCTCCTAAAATACCAAGTACCATACCCCAAAATTGGCCATATTTTCCTCACCAAAGGGTATCATCATCATCATCCACAATGTCAAACATCACCACCACGACCACAGCCACCACTCAGAATAATACTTCCGACCATCAACAATCACCACCATCACAACAATTACCATCATGGATAGACGAATTCCTCGACTTTTCCTCAGTAAGGCGAGGGGCTCACAGGCGGTCTGCCAGTGACTCTATTGCCTTCCTCGAGACATCATTTCTCGAGGAAGACTGTAGGAGTGGTGGTGGTGGAGGATTTGATAGACTGGATGATGACCAATTAATTTCCATGTTCTCTGACAATGTTGCCGGCGTATCTTTCCCGCCTTTGCCGTTGTCATCGACGTCCAACCCATCATCACCATCCTCCGACCAAAATAGCAATAACAATGAAGAGAAACCAATGGCAATGGTGATGGATGCACAACCTCAAGAGCATTATCTTCATGAAGTGAAGCCTAAGGATGAAGCCGTTGATGACGACGGTTCATGTAAAAATGAGGTGGCGGCGGCGCCATCTTCCTCCGGAAACATCACCTGCACTGAAACCGTTGTGGATCCCAAGAGGGTCAAAAGAATTTTGGCTAATAGGCAATCAGCTCAGAGGTCAAGGGTGAGAAAGCTACAATACATTTCTGAGCTTGAAAGGAGTGTAACATCTTTGCAGACGGAGGTTTCAGCATTGTCACCACGAGTTGCATTCTTGGACCATCAACGTATGATTCTTACTGTCGACAACAGTGCCATAAAGCAACGGATTGCAGCATTGGCCCAGGACAAGCTTTTCAAAGATGCTCATCAAGAAGCATTAAAGAAGGAAATAGAAAGGTTGAGGCAAATCTATCACCAACAAAACATACAAAAGATGGGAAATTCAGGCAATAATAACATTAACAATGTCCATTCTCTTCAATCTCCAACACCAACATCACTGCCACAACAACAATCTTTCCATCAGCACAAGGAGCAAATCCTCAGTTAA 1035 0.4464 MAQLPPKIPSTIPQNWPYFPHQRVSSSSSTMSNITTTTTATTQNNTSDHQQSPPSQQLPSWIDEFLDFSSVRRGAHRRSASDSIAFLETSFLEEDCRSGGGGGFDRLDDDQLISMFSDNVAGVSFPPLPLSSTSNPSSPSSDQNSNNNEEKPMAMVMDAQPQEHYLHEVKPKDEAVDDDGSCKNEVAAAPSSSGNITCTETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRMILTVDNSAIKQRIAALAQDKLFKDAHQEALKKEIERLRQIYHQQNIQKMGNSGNNNINNVHSLQSPTPTSLPQQQSFHQHKEQILS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03047 344 SUPERFAMILY Leucine zipper domain 206 260 IPR046347 GO:0003700|GO:0006355
Mepo6g03047 344 MobiDBLite consensus disorder prediction 306 344 - -
Mepo6g03047 344 MobiDBLite consensus disorder prediction 127 149 - -
Mepo6g03047 344 Pfam bZIP transcription factor 206 251 IPR004827 GO:0003700|GO:0006355
Mepo6g03047 344 SMART brlzneu 202 266 IPR004827 GO:0003700|GO:0006355
Mepo6g03047 344 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 204 256 IPR004827 GO:0003700|GO:0006355
Mepo6g03047 344 MobiDBLite consensus disorder prediction 1 58 - -
Mepo6g03047 344 CDD bZIP_plant_RF2 207 258 IPR044759 GO:0003700|GO:0006355
Mepo6g03047 344 Gene3D - 205 276 - -
Mepo6g03047 344 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 209 224 IPR004827 GO:0003700|GO:0006355
Mepo6g03047 344 Coils Coil 285 305 - -
Mepo6g03047 344 PANTHER BASIC LEUCINE ZIPPER 34 1 332 - -
Mepo6g03047 344 MobiDBLite consensus disorder prediction 173 193 - -
Mepo6g03047 344 MobiDBLite consensus disorder prediction 15 58 - -
Mepo6g03047 344 FunFam Basic leucine zipper 61 205 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03047 Mepo-Chr6 42059161 42062531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03047 1 284 bZIP Transcription Factor Family AT3G58120 50.658 4.70e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo6g03047 bZIP_1 1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03047 - - gmx:100820197 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03047 6 42059161 42062531 Mepo6g03047 6 42059161 42062531 ECH