Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03026 ATGATGAATAACGGAGTATACAGTCTCCGCACATGCCTCCGCCTCCCGGAGCATCCACTTTTCCGAGCAACTACGCTCTCCTACAATCTCCGGCGCCGGTTTTTCGTCACCGCATCATTATCGGAGAAGAAGAAAGAGAAGGTGATAGTTATTTCTGGACCCACCGGTTCCGGTAAGAGCCGTCTCGCAATGGAACTCGCTAAACGCCTCAATGGTGAAATCATTAGTGCCGATTCTGTTCAGGTGTATAAGGGTCTTGATGTCGGATCTGCAAAGCCTTCATTAAATGATAGAAAGGAAGTGCCGCATCATCTGGTTGACGTACTTCATCCATCTGAAGATTATTCTGTTGGGCAGTTTTTTGAGGATGCAAGGAAAGCGACAAGATCTATTCTTGACAACGGCCGTGTTCCGATTGTTGTTGGGGGCACTGGACTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTGCCTAAAGCCTCTGCAGAGATAACATCTCAAGCTTGTATGGAGTTAGCTGAATTACAGAGAAATGACGACTGGGAAGCTGCTGTACAGCTGGTGGTAAAAGCAGGTGATCCAAAGGTCCAACATATAGCAGTGAATGATTGGTACCGATTACGGCGTAGTCTAGAGATCATTAAGTCTAGTGGATCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGGAACAGGGTGATTATAGAGTTGCTGATGGTTCTGATTCATCTGATATCAACACTAATTATGATGCAATGAAAGAAACCGATTCAGCAAAGTTAGACTACAATTTTATGTGTTTTTTCCTTTCTAGCGACAGACTTGACCTCTACAAATCAATTGATTATCGGTGTGAAGATATGATATTAGGAGGGGATGGCCTTTTGTCCGAGGCTCAATGGCTTCTTGATATCGGTCTTCATCCAAACTCCAACTCTCCAACAAAAGCAATTGGTTACAGACAAGCCATGGATTACTTAATAGGATGCAGAGAACAAGGGGGTCAGAGTTCAGCTGGAGAATTTTACAAATTCTTCTCTGAATTTCAAAAAGCTTCAAGGAATTTCGCGAAACGACAGTTGACTTGGTTTCGTAATGAACGTATATACCATTGGCTTGATGCTTCTAAACCTCTGGAAACCGTTCTGAACTTCATTCATGATGCATACCACAATCAGAATGGAAATCTTTTTGTGCCCGAACACCTTAGAATGTCGAGAGATATTACTAATTCTCGAATAGCTGCTAAACTAAAGGCTTACCGCACCAGGAATAGGCATTTAGTTAACGGGGAAGATTGTTATCCTATTTTGGAATGGATACAGAAGACTCAGAAGTGA 1350 0.4274 MMNNGVYSLRTCLRLPEHPLFRATTLSYNLRRRFFVTASLSEKKKEKVIVISGPTGSGKSRLAMELAKRLNGEIISADSVQVYKGLDVGSAKPSLNDRKEVPHHLVDVLHPSEDYSVGQFFEDARKATRSILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASAEITSQACMELAELQRNDDWEAAVQLVVKAGDPKVQHIAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQGDYRVADGSDSSDINTNYDAMKETDSAKLDYNFMCFFLSSDRLDLYKSIDYRCEDMILGGDGLLSEAQWLLDIGLHPNSNSPTKAIGYRQAMDYLIGCREQGGQSSAGEFYKFFSEFQKASRNFAKRQLTWFRNERIYHWLDASKPLETVLNFIHDAYHNQNGNLFVPEHLRMSRDITNSRIAAKLKAYRTRNRHLVNGEDCYPILEWIQKTQK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03026 449 Gene3D - 156 227 - -
Mepo6g03026 449 FunFam tRNA dimethylallyltransferase 9 156 227 - -
Mepo6g03026 449 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 45 381 IPR039657 -
Mepo6g03026 449 Gene3D - 45 425 IPR027417 -
Mepo6g03026 449 Pfam IPP transferase 81 370 - -
Mepo6g03026 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 181 IPR027417 -
Mepo6g03026 449 Hamap tRNA dimethylallyltransferase [miaA]. 48 387 IPR018022 GO:0008033
Mepo6g03026 449 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 48 225 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03026 Mepo-Chr6 41802440 41808322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03026 51 348 C2H2 Transcription Factor Family AT2G27760 26.403 2.12e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03026 K00791 - gmx:100808814 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03026 6 41802440 41808322 Mepo6g03026 6 41802440 41808322 ECH