Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03023 ATGGAATCATCATTCAATCCCATCTCATGCAACAGAAAACCACTTTATAGGTTAGAAACCAAAAATGTATCATACAAATTGTGCAGCCAACTTGATGAACTTAGAACTCTTTGTTTCGGTTCGAATCCTAGGAGAGGTTCAAAGTTCATTTTGAAGGATGTAAATTGCGAGGCAAGGCCAGGGGAGGTTACCGCTATTGCTGGTCCTAGTGGAGCTGGAAAAACAACACTGCTTGAAATTCTTGCTGGGAGAATACCCTCTTGCAAAGTTTCTGGACAAGTACTTGTCAATCAGAAGCCGATGGATGTGAACAGATTCAGAAGAGACTCGGGGCACGTAACACAAGAAGATGCATTGTTTCCATCGCTTACGGTTAGAGAGACGCTCATGTATAGTGCTTTGTTGAGGCTTCCCGGGGGGCGAAAAGTGGCTGCTATGAGAGTTGCAGAGTTGATGAAGGAGCTCGGGTTGGATTCTATTGCAGATTCAAGAATTGGCAATGGATCAGACCATGGTATATCAGGCGGGGAAAGGCGTAGAGTTTCCATTGGTGTTGACTTGGTTCATGACCCTGCAATTATTTTAATTGATGAACCAACTTCAGGTTTGGATTCAGCATCAGCTCTTAATGTAATCTCATTGCTTAGACTAATGGCATTTAATCAAGGTAAGACAGTTGTTTTAACTATCCACCAACCCGGTTTCCGAATATTAGAGCAACTTGACAGCCTCATTTTGCTATCTGATGGATTTGTCATGCATAATGGTTCATTGAATCTTCTTGAGGCAAGGCTCGCTTTATCCGGCCATCGCATCCCCAACCATGTCAATGTCCTAGAATTTGCTCTTGATGTCATGCAAAGCTTGGTTATACATACTTCAGAACCTGGGAACAATCAATTTCTTCTCAATGATGACAAAGAGCACCAAGATCACAAGATGATGATGCAGTGCTCTATGATTGTCAAAGAAAAGGCAATACTGTACTCAAATTCTTCAATAGAGGAGATTTTAATCCTAGGACAAAGATTTTGCAACAACATATTCAGAACCAAGCAACTCTTTTTTACAAGGGTCATACAAGCCTTAGTAGCTGGATTTATATTGGGGACTATATTCTTGAATGTTGGGAACAAACAAAGTAAGGTAGCGCTGCAAACGCGAAGCGGCTTCTTTGCTTTCAGCCTTACCTTTCTGTTATCATCAACAACAGAAGGGCTGCCTATTTTCTTGGAGGAGAGAAGAACTTTTATGAGAGAGACCGCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTTTAGCAAATACATTTGTGTTTCTTCCTTTTCTTCTAATGGTTGGTCTTCTGTATACTACTCCAGTTTATTGGCTGGTAGGATTAAGGAAAGACATCGACAGTTTCCTTTACTTCTCTTTAGTGGTTTGGTTGGTCCTATTAATGTCAAATTCTCTTGTGGCTTGTTTCAGCGCCCTAGTTCCAAATTTCATCCTCGGAAGCTCGGTAATTGCTGGTCTAATGGGGTCTTTCTTTCTATTCTCAGGGTATTTCATATCAAAGGAGAAAATACCTAGTTACTGGATTTTTATGCACTATATAAGCCTATTCAAGTATCCATTTGAGTGCCTTATGATAAATGAGTATGGAGGTGAGCAAGGGAAAACAAGATGCATAGAAGTTAATAACGGGGAATGCATTTTATATGGATTTGAGTTCTTAAGACAACAAGGTCTCAAAGAGTCACACAAATGGACAAATTTGGCTGTAATGTTAAGCTTTATAATAGGATGCACTGTGAAAATTGACCGGTCTAAGAGCAGCCCAGTTCTTACAGCAGGCTCCTAG 1842 0.4055 MESSFNPISCNRKPLYRLETKNVSYKLCSQLDELRTLCFGSNPRRGSKFILKDVNCEARPGEVTAIAGPSGAGKTTLLEILAGRIPSCKVSGQVLVNQKPMDVNRFRRDSGHVTQEDALFPSLTVRETLMYSALLRLPGGRKVAAMRVAELMKELGLDSIADSRIGNGSDHGISGGERRRVSIGVDLVHDPAIILIDEPTSGLDSASALNVISLLRLMAFNQGKTVVLTIHQPGFRILEQLDSLILLSDGFVMHNGSLNLLEARLALSGHRIPNHVNVLEFALDVMQSLVIHTSEPGNNQFLLNDDKEHQDHKMMMQCSMIVKEKAILYSNSSIEEILILGQRFCNNIFRTKQLFFTRVIQALVAGFILGTIFLNVGNKQSKVALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTFMRETARGAYRVSSYVLANTFVFLPFLLMVGLLYTTPVYWLVGLRKDIDSFLYFSLVVWLVLLMSNSLVACFSALVPNFILGSSVIAGLMGSFFLFSGYFISKEKIPSYWIFMHYISLFKYPFECLMINEYGGEQGKTRCIEVNNGECILYGFEFLRQQGLKESHKWTNLAVMLSFIIGCTVKIDRSKSSPVLTAGS 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03023 613 Pfam ABC-2 type transporter 336 547 IPR013525 GO:0016020|GO:0140359
Mepo6g03023 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 16 596 - -
Mepo6g03023 613 Gene3D - 33 270 IPR027417 -
Mepo6g03023 613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 274 IPR003439 GO:0005524
Mepo6g03023 613 SMART AAA_5 60 257 IPR003593 GO:0016887
Mepo6g03023 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 261 IPR027417 -
Mepo6g03023 613 Pfam ABC transporter 51 201 IPR003439 GO:0005524
Mepo6g03023 613 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Mepo6g03023 613 CDD ABCG_EPDR 41 256 - -
Mepo6g03023 613 FunFam ABC transporter G family member 10 35 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03023 Mepo-Chr6 41782626 41784928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03023 11 261 Calmodulin-binding Proteins AT2G36910 29.730 4.36e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03023 K05681 - gmx:100776372 1006.51