Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03019 ATGGAACATTTATGCGATGATAACTTTGAAGGATCTAATGAAGAAAGACAGATTTTTACAGAGGTCTTTTTTGGTGATGACACTTTTCAGTCTAGTCAGAGGCGTGTTATTTCTGGAGCCATCAACCTTGAACATGAATTCACAAAAAACACATTTAAGTCATTTGGCTCTAGTAATGAAAACTCGGTCATATGGCGTCCCTCGTCTTCAAGATTTACCCATCCCGAGGAGGACATTAATGCAATTCAGCATTCCAATGAGACTGCTCTGGGGTGTTTGCCAGAGAGTTTAACTTGTGAAGATCAGAATGATGAAAATGTAAATGTCAAACGTATGAAATTTTCTCTGCATGAACTTCCTTGTAGTAGATCTAATTCAGATGTTTTGGGTTCATCTGGAATTCCAAAAGTAGTAATTTCCAACCTGACTTGTGCTGCTACAGACTGTGATAGTGACTCGATTGCATTTCGTACAGTTGAATCATCTAAACGCGGTGTGATATCTAGTTGCTATCTATTGAAGCATAACTTGGTACAGAAAATTCATGCTTCTAATGATGATGCAGATGTTACAAATTGTAAATCTAAAACAGAAGATGGGAACATCCCAAAGGAGGTGTCTGTAAGTAAGGCAGTTGCTTCTCCTGTATCCCAGGAGAGCTCGGCAAACAGGCTAGTAGTAACGAGTCCATCAATCACTGTTGTGAAGAAGTCCGAGTCTCCCTTACGAACTGAGGAAATGCCTGAAGGGTTTCAATCTTCTAATATGGTTATCTCAAATTCATTGTCCCAGCTTGACCAAGAGGATCCCCGTCCCTTACTGCAGTTTCATATCGTGCAGTTGCTTACGATGTCAGGATGGTCTATTGGGAAGCATCAACGGCCTTCTAGGCGGTGGATGGAGTCATTCTACAAGACACCAACGGGAAAAACTATGCGGGAATTTACAAAAGTTTGGAGATTATGTGGCCAACTTTTGTCTGTTGAAAAGTGCAATGTAACATATGGAGGCCGTAAGGAATGGACCAATATTAGCGATTTTTGGTCTGATCTATCGAGTGCACTGAAAAATGTTGAAAAATTAAAAAACCAGCCAGAGACTGCTGCTATGTTGGCTTATCAATGGTGGATTATGGATCCTTTTGTAGTAGTTATACATTTTGATAGAAAGGTCGGTGCTCTGAAAAGGGGGGAAGAGGTTATAAAAGCAAGTTGTAGTTTAGTTTCTAGCAAGGGTAAAATGGCATATTCTTCAAAAAAAGAGGGTAAAATGGCATATGCTCCAGTTGATTCAGCCTTGGAGAATACATCTCACACTCTTTCTGAACAAAAGCACGACCAAGCCATTTTCTGCGACTCTTCAACAGCCACCAGAACCACAGAAATATCTGCTTTTATGATAAACAGTCATGCTTGTAAACAGACATCTGACGGTAACCAAGAAGATATGTATGTCGAAGAACATAAACCAAACATCATAGAAAACCGATTAATGGAAATGTCAGTGAGCAAAAGTAGTATGGATCTAGCCTCTTTACCTGCTTGTGCATTGGGTAGCACTGTTACCCATTCAAGTGCTTCCTCTTTTGATGTTCTTACAAGCTCTGGAAATTTGGATTTGGAATCTAAAGTGAATGCTGTTCATCAAGCTAAACTTAGAAATTCTAAAAGCTTTGATAAGCACGCATCAGAAAATCGGTCCGAATGCAGTGAGGAAGAGGGGAGGAAAATCTCAATGGCTTCTGTTTTTGGGAAAGATAGTACATGGTCTTCCTCTAATGGTATTCTTAAAAAGAAAATGCGGAAGAAGTGCAAAAGGATATCTCAAATCAAACCGAGTATGTTATACCACAGTGACATACTGGGATCAACTATTACTGATCAGGTGCAGTCACTGAATGGTGATGTATGTGGCACTCAGACTGTGTTGGAAGAAGTTCAAGATTATGTAGTTGACAGTGTGGGAAAAAAAAGGAACAAGAAGAAGTTATCAGGCAGTGCAAACCAGCGACATATTAAGAAAACAAACTACTCCATTACTAAAACAAATAAGTCCAATAGATGCCATATTGAAGATGACGATCTATTAGTGTCAGCAATACTCAAGAATAAGGACTTCAACCCAAAGATAATCCGAGGTAAATCTAGAGCTAAATCCGGCAAATCAAGGGGTTTGAGAAAGCTTAAAAGCCATAAAGGCCGTTGCAGGTTGCTGCCAAGGAATCCTTGTATTGGAGGGAAGCACAATATGGATGGGAAGAAGTATTATCTTGGGGAAAGGACTCTCTTGTCCTGGTTGATTGAGAATGAGGTCATATGTTTAAATGATATCATTCAATACCGTAACCCTAAAGATAATTCTGTCACTAAGGACGGCAAGATCACCAAAGACGGTATTGTTTGTAAGTGTTGCAGTAAGGTGCTTACATTATCAGAGTTCAAGATTCATGCTGGGTTTACACTGAGTCGCCCTTGCTTGAATCTTTTCATGAAGTCTGGTGAGCCCTTTACACTTTGCCTCCTTCAAGCTTGGTCAGCTGAATACAAAGCCAGGAAAAGTCAAAATCAAGCTGGGAACATTGTTGATAATGACAGAAATGATGATTCGTGCGGGTTGTGTGGTGAGGGAGGTGAGCTGATATGTTGTGATAACTGTCCCTCTACTTTTCACCTGGCTTGTTTGTCCGCTCAGGAGATCCCCGATGGCAACTGGTACTGCATATACTGCACTTGTCGGATTTGTGGAAATTTGGTCGTTGATAAAGAGGTTTCAGATGTACATGATTCATCGCAATGTTCACAATGCGAACATAAATATCACAAGAAATGCCTCGGAGAAAGAGATAAACAAGAAGGAACTGTTTCAGACACTTGGTTTTGTAGTCAAAGTTGTCGGGAGGTATACTGTACTCTCCAATCTCAGGTTGGGCTAGTTAATCAAGTTGCTGATGGCTTCGCCTGGACGCTTCTTAGATGCATACATGATGACCAGAAGGTTCATTCTGCTCAGTGGTTTGCCCTAAAGGCAGTATGCAATACAAAATTAGCTGTCGCCCTTACAATCATGGAGGAGTGTTTCGTGTCAATGTTAGATCTAAGAACAGGCATCCACATGATACCCCAAGTTTTATTCAATTGGGGGTCTGATTTTGCTCGTCTGAATTTTCAAGGGTTTTACACAGTGGTGTTGGAAAAACAGGATGTGTTAATATCTGTAGCATCTATCAGAGTGCACGGGACTACCGTTGCAGAGATGCCTCTAATTGCAACTTGCAGTCGGTATCGTCGCCAAGGAATGTGCCGACGCCTCATGAGCTCAATCGAAGAGATGTTAACATCTGTCAAGGTAGAAAAGCTTGTGGTATCAGCCATTCCGGATTTGGTGGAGACTTGGACCAAGGGCTTTGGATTCGTGCCTGTAGGCGACATTGAAAAACGAAGGTTAAAGAAAAACAACTTAATGGTTTTTCCTGGAACAGTGTTACTTGAAAAATCCTTGTATGGCAAGAAGAAAGATGAAGGATTGTGTGATCAATCAACTTTAGCAACAGATGAATCGTTCAAAGCAGGTATCTGTTCTGAAGGAATGGACATAGCCGAATCATTGCCGCTAGCTAAGTCAGAGTATGAACCTGTGGACTGCAAAAATCAACCAGACAATAGGGCCGACAGTGAAATCAGCAGAGATGATAATATTCTAGCCGTTGAGATTGCATTAGGAGACAGAGAATCAACAGAGACAAGTAGGTCTTTCGGTGAAGAGAAAATCACCCCTTTTGAAGGAAACAATGTGGAGGAACCAAGAACAAGTGCCAACAGAGATGGCACTGAATCTGGTGGAAGAGTTTTTGAGGACAAGAATATCAATATAGGTGAAGTAAAGGAAAATGATTTGCATGAACATGTTTCAAATGTGTCGTGCAAGACATTTTCAGGCAACAATTTTGACACAGTATCTAATTTTGAATGCTCAGCGATGTATGATGAAACCGTTATTTTTGGTTCACTAGCAAACTCTGCAAATTAG 4026 0.4069 MEHLCDDNFEGSNEERQIFTEVFFGDDTFQSSQRRVISGAINLEHEFTKNTFKSFGSSNENSVIWRPSSSRFTHPEEDINAIQHSNETALGCLPESLTCEDQNDENVNVKRMKFSLHELPCSRSNSDVLGSSGIPKVVISNLTCAATDCDSDSIAFRTVESSKRGVISSCYLLKHNLVQKIHASNDDADVTNCKSKTEDGNIPKEVSVSKAVASPVSQESSANRLVVTSPSITVVKKSESPLRTEEMPEGFQSSNMVISNSLSQLDQEDPRPLLQFHIVQLLTMSGWSIGKHQRPSRRWMESFYKTPTGKTMREFTKVWRLCGQLLSVEKCNVTYGGRKEWTNISDFWSDLSSALKNVEKLKNQPETAAMLAYQWWIMDPFVVVIHFDRKVGALKRGEEVIKASCSLVSSKGKMAYSSKKEGKMAYAPVDSALENTSHTLSEQKHDQAIFCDSSTATRTTEISAFMINSHACKQTSDGNQEDMYVEEHKPNIIENRLMEMSVSKSSMDLASLPACALGSTVTHSSASSFDVLTSSGNLDLESKVNAVHQAKLRNSKSFDKHASENRSECSEEEGRKISMASVFGKDSTWSSSNGILKKKMRKKCKRISQIKPSMLYHSDILGSTITDQVQSLNGDVCGTQTVLEEVQDYVVDSVGKKRNKKKLSGSANQRHIKKTNYSITKTNKSNRCHIEDDDLLVSAILKNKDFNPKIIRGKSRAKSGKSRGLRKLKSHKGRCRLLPRNPCIGGKHNMDGKKYYLGERTLLSWLIENEVICLNDIIQYRNPKDNSVTKDGKITKDGIVCKCCSKVLTLSEFKIHAGFTLSRPCLNLFMKSGEPFTLCLLQAWSAEYKARKSQNQAGNIVDNDRNDDSCGLCGEGGELICCDNCPSTFHLACLSAQEIPDGNWYCIYCTCRICGNLVVDKEVSDVHDSSQCSQCEHKYHKKCLGERDKQEGTVSDTWFCSQSCREVYCTLQSQVGLVNQVADGFAWTLLRCIHDDQKVHSAQWFALKAVCNTKLAVALTIMEECFVSMLDLRTGIHMIPQVLFNWGSDFARLNFQGFYTVVLEKQDVLISVASIRVHGTTVAEMPLIATCSRYRRQGMCRRLMSSIEEMLTSVKVEKLVVSAIPDLVETWTKGFGFVPVGDIEKRRLKKNNLMVFPGTVLLEKSLYGKKKDEGLCDQSTLATDESFKAGICSEGMDIAESLPLAKSEYEPVDCKNQPDNRADSEISRDDNILAVEIALGDRESTETSRSFGEEKITPFEGNNVEEPRTSANRDGTESGGRVFEDKNINIGEVKENDLHEHVSNVSCKTFSGNNFDTVSNFECSAMYDETVIFGSLANSAN 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03019 1341 CDD PHD1_AIRE 870 909 - -
Mepo6g03019 1341 MobiDBLite consensus disorder prediction 1259 1282 - -
Mepo6g03019 1341 PANTHER PHD FINGER FAMILY PROTEIN 2 1250 - -
Mepo6g03019 1341 Gene3D - 1014 1151 - -
Mepo6g03019 1341 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1021 1143 IPR016181 -
Mepo6g03019 1341 ProSiteProfiles Zinc finger PHD-type profile. 867 912 IPR019787 -
Mepo6g03019 1341 ProSitePatterns Zinc finger PHD-type signature. 870 909 IPR019786 -
Mepo6g03019 1341 Pfam Tify domain binding domain 792 842 IPR032308 -
Mepo6g03019 1341 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1017 1167 IPR000182 GO:0016747
Mepo6g03019 1341 SUPERFAMILY FYVE/PHD zinc finger 858 911 IPR011011 -
Mepo6g03019 1341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 854 931 IPR013083 -
Mepo6g03019 1341 SMART PHD_3 911 965 IPR001965 -
Mepo6g03019 1341 SMART PHD_3 869 910 IPR001965 -
Mepo6g03019 1341 Pfam PHD-finger 870 911 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03019 Mepo-Chr6 41730507 41740311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03019 1 576 PHD Transcription Factor Family AT3G14980 29.215 1.20e-45 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo6g03019 TDBD 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03019 - - mtr:25487250 2613.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03019 6 41730507 41740311 Mepo6g03019 6 41730507 41740311 ECH