Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02999 ATGTTTGATAGCAAGACACTTTTATCAGCAATGGCCTCTATTGTGCTAGTGCGAAACATCACAAATGAAGTCATTCCTCATGAAATCCTAAACTTTGTACAATCGGGACTTCACCATGTTTTTCGCCAATTCTCAGCGCAGTTTACCATAGTCATTGATGAATTTCAAGGGATGGCAAAAAACCAAGTTTTTGAGGCTGCAGAAACCTATCTAGGGACTAAAGCAACAGTCTCAACAGAAAGAGTTAAAGTAAGCAAATCTCATGATCACAAGAAACTTTCATTCAATATTGATAGAGGTGAAGAAGTGAGTGATGATTTTGAAGGCATTAGAGTAAAGTGGAAATTAATATGCATACAAGAAGATGGATCACGAATTCGACATAATGATATGAACGCCTCATCCATGTCAGAAACTAGATTCTATGAACTAACTTTTCACAAAAAACACAAGAACACGATCTTCGATTCATATTTACCTTATGTGATGGAGATAGCTAAACAAATTAAACAAGATAACATGGCTATCAAGATTCACTCAAATGAATATGGTTGCTGGAGCCATGAACCTGTTAAGTTCAACCATCCAATGAGTTTCAACACTCTTGCAATTGATGAAGAGCTTCAAAGGGAAATTATGAATGATTTGGACAATTTTGTAAAGGCCAAAGAGTTTTATAGAAGAACAGGGAAAGCTTGGCAACGCGGTTACTTGTTGTATGGTCCTCCTGGTACTGGAAAGTCCAGCCTGATTGCAGCCATGGCTAACTATCTCAACTATGATATCTATGACTTGGATCTCACTGATGTAGGGGATAATAAGAGCTTGAAGCAACTTATTCTTGGTATGTCCAACCATTCTATACTTGTGATAGAGGATATCGATTGCACTATAAATTTGCAGAACCGAGAAGAAGATGAAGACGTGGTTGACAATCGATACAATAAGGTGACACTTTCAGGACTATTGAATGCAGTAGATGGTCTTTGGTCATGCTGTGGAGAGGAACACATAATTGTTTTCACAACAAATCACAAAGAAAGACTTGATCCTGCTCTGTTAAGGCCTGGTAGAATGGACAAGCTAATTCACTTGTCATATTGCAGCTTTTCTGCTTTTAAGCAATTGGTTGTTAACTACCTTTGCATTACTGAACATGAACTCTTTGAAAAGATTGAAGTGCTTCTAGGACAAGTGCAAGTTACTCCGGCTGAAATTGCAGAAGAGTTAACAAAGGATTGTGATGCTACAGAATGCCTACAAGACCTTATCAAATCCCTCCAAGCTAAGAAAATGATCAAGGAAAAGATAAAGAATGAAGAAAATATCAAAGAAGAACCTGAACCTAAGAAAATGATCAAGGAAGAGATTAAGAATGAAGAAAATATCAAAAAAGAACATGAACTAGGTAGATATGAACAGGGGCGGATCTAG 1434 0.3724 MFDSKTLLSAMASIVLVRNITNEVIPHEILNFVQSGLHHVFRQFSAQFTIVIDEFQGMAKNQVFEAAETYLGTKATVSTERVKVSKSHDHKKLSFNIDRGEEVSDDFEGIRVKWKLICIQEDGSRIRHNDMNASSMSETRFYELTFHKKHKNTIFDSYLPYVMEIAKQIKQDNMAIKIHSNEYGCWSHEPVKFNHPMSFNTLAIDEELQREIMNDLDNFVKAKEFYRRTGKAWQRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTDVGDNKSLKQLILGMSNHSILVIEDIDCTINLQNREEDEDVVDNRYNKVTLSGLLNAVDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRMDKLIHLSYCSFSAFKQLVVNYLCITEHELFEKIEVLLGQVQVTPAEIAEELTKDCDATECLQDLIKSLQAKKMIKEKIKNEENIKEEPEPKKMIKEEIKNEENIKKEHELGRYEQGRI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02999 477 CDD RecA-like_BCS1 212 365 - -
Mepo6g02999 477 SMART AAA_5 233 369 IPR003593 GO:0016887
Mepo6g02999 477 Gene3D - 364 437 - -
Mepo6g02999 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 412 IPR027417 -
Mepo6g02999 477 PANTHER BCS1 AAA-TYPE ATPASE 7 435 - -
Mepo6g02999 477 Pfam ATPase family associated with various cellular activities (AAA) 238 366 IPR003959 GO:0005524|GO:0016887
Mepo6g02999 477 Gene3D - 187 363 IPR027417 -
Mepo6g02999 477 Pfam Domain associated at C-terminal with AAA 25 117 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02999 Mepo-Chr6 41564906 41567031 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02999 235 369 Calmodulin-binding Proteins AT3G56690 28.671 2.62e-11 64.3